1.S.2.1.3 Trimeric bacterial microcompartment shell protein of 230 aas. The protein hydropathy plot shows 5 peaks moderate hydrophobicity that may be TMSs. Two bacterial microcompartment shell proteins [EtuA (ethanol utilization
shell protein A) and EtuB] are encoded in the genome clustered
with the genes for ethanol utilization. The function of the bacterial
microcompartment is to facilitate fermentation by sequestering the
enzymes, substrates and intermediates. Recent structural studies of
bacterial microcompartment proteins have revealed both hexamers and
pentamers that assemble to generate the pseudo-icosahedral bacterial
microcompartment shell. Some of these shell proteins have pores on their
symmetry axes. Heldt et al. 2009 reported the structure of the trimeric bacterial
microcompartment protein EtuB, which has a tandem structural repeat
within the subunit and pseudo-hexagonal symmetry. The pores in the EtuB
trimer are within the subunits rather than between symmetry related
subunits. The evolutionary advantage of this is that it
releases the pore from the rotational symmetry constraint allowing more
precise control of the fluxes of asymmetric molecules, such as ethanol,
across the pore. EtuA was modeled suggesting that the two
proteins have the potential to interact to generate the casing for a
metabolosome (Heldt et al. 2009).
|
Accession Number: | 3IO0_A |
Protein Name: | A Chain A, EtuB protein |
Length: | 231 |
Molecular Weight: | |
Species: | Clostridium kluyveri DSM 555 [431943] |
Number of TMSs: | 1 |
Substrate |
ethanol |
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1: APTMTEFVGT AGGDTVGLVI ANVDSLLHKH LGLDNTCRSI GIISARVGAP AQMMAADEAV
61: KGTNTEVATI ELPRDTKGGA GHGIFIVLKA ADVSDARRAV EIALKQTDKY LGNVYLCDAG
121: HLEVQYTARA SLIFEKAFGA PSGQAFGIMH AAPAGVGMIV ADTALKTADV KLITYGSPTN
181: GVLSYTNEIL ITISGDSGAV LQSLTAARKA GLSILRSMGQ DPVSMSKPTF