1.W.4.1.6 ORF43 portal protein of 605 aas. It forms a portal in the viral capsid through which
viral DNA is translocated during DNA packaging. It assembles as a dodecamer
at a single fivefold axe of the T=16 icosahedric capsid and binds to the
molecular motor that translocates the viral DNA, termed terminase, The KSHV icosahedral capsid includes a portal vertex, composed of 12 protein
subunits encoded by open reading frame (ORF) 43, which enables
packaging and release of the viral genome into the nucleus through the
nuclear pore complex (NPC) (Dünn-Kittenplon et al. 2021). ORF43 enables packaging and release of the viral genome into
the nucleus through the nuclear pore complex (NPC). Capsid
vertex-specific component (CVSC) tegument proteins, which directly
mediate docking at the NPCs, are organized on the capsid vertices and
are enriched on the portal vertex. The portal vertex of KSHV promotes docking of capsids at nuclear pores (Dünn-Kittenplon et al. 2021). The tegument proteins (e.g., E5LBZ1) directly mediates docking at the NPC.
|
Accession Number: | Q76RH0 |
Protein Name: | Portal protein |
Length: | 605 |
Molecular Weight: | 68014.00 |
Species: | Human herpesvirus 8 (HHV-8) [37296] |
Location1 / Topology2 / Orientation3: |
Virion1 |
Substrate |
deoxyribonucleic acid |
---|
1: MLRMNPGLGS SISVHPSELS ISLFEILQGK YSYVRGQTLH CSLRNPGVFF RQLFIHLYKN
61: ALANCSYDHV LSDWRTYESS AKTRWPEKEA QWGSYRRSTF DSWAQTMRMT LDHLLLNAIN
121: RVLYAKTQLS YERYVDWVVT VGMVPVVKHT PDHKLVNSIQ EQLMKDCQRL ASGEKTIGRI
181: LTSVTQEISN LVSSLSALYI PGYSEVSIDY DCVKNTFVGL YKQKRVHVEV ITMPAILAGR
241: VIFDSPIQRM YTSIMSCHRT AEHAKLCQLL NTAPTKALVG SACNNVYKDI MTHLEQASQR
301: TDPKRELLNL LMKLAENKTV SGVTDVVEDF VTDVSQNIVD KNKLFGTGQE TTTQGLRRQV
361: SNSVFKCLTN QINEQFDTIT QLEKERELCM KRLKCIETQL SHQQPGDAKG PGSVNLLTAN
421: TFQSLGRLQD PSLQLTSSHI PSGSAVLNSF FSSYIPPVRE SMKDLTNLWE SEMFQTYKLA
481: PVVDNQGQRL SVTYSQDTIS ILLGPFTYVI ADLLQMELIS HSFVSSSLQD IAAYLYQTSR
541: LFVYITDVGQ KYCLVTPPFE NVPGKGPGET DWSANEYSCP EDSRVRRGLS RIPPPCGAPP
601: CPGSA