1.W.6.1.1 The Bacillus phage phi29 (φ29) portal protein of 309 aas. It forms the portal vertex of the capsid (Ibarra et al. 2000; Fu and Prevelige 2009; Grimes et al. 2011).
This portal plays roles in head assembly, genome packaging,
neck/tail attachment, and genome ejection. The portal
protein multimerizes as a single ring-shaped homododecamer arranged
around a central channel (Guasch et al. 2002, Grimes et al. 2011). It binds to the 6 packaging RNA molecules (pRNA), forming a double-ring
structure which in turn binds to the ATPase gp16 hexamer, forming the
active DNA-translocating motor (Xiao et al. 2005, Simpson et al. 2000). This complex is essential for the specificity of packaging from the left DNA end.
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Accession Number: | P04332 |
Protein Name: | Portal protein |
Length: | 309 |
Molecular Weight: | 35878.00 |
Species: | Bacillus phage phi29 [10756] |
Number of TMSs: | 1 |
Location1 / Topology2 / Orientation3: |
Virion1 |
Substrate |
deoxyribonucleic acid |
---|
1: MARKRSNTYR SINEIQRQKR NRWFIHYLNY LQSLAYQLFE WENLPPTINP SFLEKSIHQF
61: GYVGFYKDPV ISYIACNGAL SGQRDVYNQA TVFRAASPVY QKEFKLYNYR DMKEEDMGVV
121: IYNNDMAFPT TPTLELFAAE LAELKEIISV NQNAQKTPVL IRANDNNQLS LKQVYNQYEG
181: NAPVIFAHEA LDSDSIEVFK TDAPYVVDKL NAQKNAVWNE MMTFLGIKNA NLEKKERMVT
241: DEVSSNDEQI ESSGTVFLKS REEACEKINE LYGLNVKVKF RYDIVEQMRR ELQQIENVSR
301: GTSDGETNE