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2.A.1.14.33
L-galactonate transporter, YjjL or DgoT of 460 aas and 12 TMSs. The D-galactonate transporter DgoT has been solved at atomic resolution (Dmitrieva et al. 2024). Protonation of D46 and E133 precedes galactonate binding, and substrate binding induces closure of the extracellular gate, with the conserved R47 coupling substrate binding to transmembrane helix movement. After isomerization to an inward-facing conformation, deprotonation of E133 and subsequent proton transfer from D46 to E133 opens the intracellular gate and permits galactonate dissociation either in its unprotonated form or after proton transfer from E133. After release of the second proton, apo DgoT returns to the outward-facing conformation (Dmitrieva et al. 2024).

Accession Number:P39398
Protein Name:L-galactonate transporter
Length:453
Molecular Weight:49440.00
Species:Escherichia coli (strain K12) [83333]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate D-galactonic acid

Cross database links:

DIP: DIP-12656N
Entrez Gene ID: 948879   
Pfam: PF07690   
KEGG: eco:b4356   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0042873 P:aldonate transport
GO:0055085 P:transmembrane transport

References (5)

[1] “Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.”  Burland V.D.et.al.   7610040
[2] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[3] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[4] “Global topology analysis of the Escherichia coli inner membrane proteome.”  Daley D.O.et.al.   15919996
[5] “Systems approach to refining genome annotation.”  Reed J.L.et.al.   17088549

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MEKENITIDP RSSFTPSSSA DIPVPPDGLV QRSTRIKRIQ TTAMLLLFFA AVINYLDRSS 
61:	LSVANLTIRE ELGLSATEIG ALLSVFSLAY GIAQLPCGPL LDRKGPRLML GLGMFFWSLF 
121:	QAMSGMVHNF TQFVLVRIGM GIGEAPMNPC GVKVINDWFN IKERGRPMGF FNAASTIGVA 
181:	VSPPILAAMM LVMGWRGMFI TIGVLGIFLA IGWYMLYRNR EHVELTAVEQ AYLNAGSVNA 
241:	RRDPLSFAEW RSLFRNRTMW GMMLGFSGIN YTAWLYLAWL PGYLQTAYNL DLKSTGLMAA 
301:	IPFLFGAAGM LVNGYVTDWL VKGGMAPIKS RKICIIAGMF CSAAFTLIVP QATTSMTAVL 
361:	LIGMALFCIH FAGTSCWGLI HVAVASRMTA SVGSIQNFAS FICASFAPII TGFIVDTTHS 
421:	FRLALIICGC VTAAGALAYI FLVRQPINDP RKD