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2.A.22.6.1
Na+/Amino acid transporter 1, SIT1/IMINO (SLC6A20). Transports imino acids such as proline (Km=0.2 mM), pipecolate, and N-methylated amino acids such as MeAIB and sarcosine (Na+-dependent, Cl--stimulated, pH-independent, voltage-dependent) (Li+, but not H+ can substitute for Na+) (Takanaga et al., 2005). It is a 2Na+/1Cl--proline cotransporter (Bröer et al., 2009). To identify new inhibitors of the proline transporter SIT1, its expression in Xenopus laevis oocytes was optimized. Trafficking of SIT1 was augmented by co-expression of angiotensin-converting enzyme 2 (ACE2) in oocytes, but there was no strict requirement for co-expression of ACE2. A pharmacophore-guided screen identified tiagabine as a potent non-competitive inhibitor of SIT1 (Bröer et al. 2024).  The cryo-EM structure of ACE2-SIT1 bound with tiagabine was determined. The inhibitor binds close to the orthosteric proline binding site with its size extends into the cytosolic vestibule. This causes the transporter to adopt an inward-open conformation, in which the intracellular gate is blocked. This study provides the first structural insight into inhibition of SIT1 and generates tools for a better understanding of the ACE2-SIT1 complex (Bröer et al. 2024).

Accession Number:Q64093
Protein Name:Sodium- and chloride-dependent transporter XTRP3 (Solute carrier family 6 member 20) (Neurotransmitter transporter rB21A)
Length:616
Molecular Weight:68971.00
Species:Rattus norvegicus (Rat) [10116]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Apical cell membrane1 / Multi-pass membrane protein2
Substrate chloride, lithium(1+), sodium(1+), alpha-amino acid, sarcosine, proline, pipecolic acid

Cross database links:

RefSeq: NP_579830.1   
Entrez Gene ID: 113918   
Pfam: PF00209   
KEGG: rno:113918   

Gene Ontology

GO:0016324 C:apical plasma membrane
GO:0005887 C:integral to plasma membrane
GO:0015171 F:amino acid transmembrane transporter activity
GO:0005328 F:neurotransmitter:sodium symporter activity
GO:0006865 P:amino acid transport
GO:0006836 P:neurotransmitter transport

References (2)

[1] “Molecular cloning of an orphan transporter. A new member of the neurotransmitter transporter family.”  Smith K.E.et.al.   8001687
[2] “Identification of mammalian proline transporter SIT1 (SLC6A20) with characteristics of classical system imino.”  Takanaga H.et.al.   15632147

External Searches:

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRLAIKRRAS RGQRPGPDEK RARDMEKARP QWGNPLQFVF ACISYAVGLG NVWRFPYLCQ 
61:	MYGGGSFLVP YLIMLIVEGM PLLYLELAVG QRMRQGSIGA WRTISPYLSG VGVASVVVSF 
121:	FLSMYYNVIN AWGFWYLFHS FQDPLPWSVC PLNSNRTGYD EECEKASSTQ YFWYRKTLNI 
181:	SPSIQENGGV QWEPALCLTL AWLMVYLCIL RGTESTGKVV YFTALMPYCV LIIYLVRGLT 
241:	LHGATNGLMY MFTPKIEQLA NPKAWINAAT QIFFSLGLGF GSLIAFASYN EPSNDCQKHA 
301:	VIVSVINSST SIFASIVTFS IYGFKATFNY ENCLNKVILL LTNSFDLEDG FLTASNLEEV 
361:	KDYLASTYPN KYSEVFPHIR NCSLESELNT AVQGTGLAFI VYAEAIKNME VSQLWSVLYF 
421:	FMLLMLGMGS MLGNTAAILT PLTDSKVISS YLPKEAISGL VCLINCAVGM VFTMEAGNYW 
481:	FDIFNDYAAT LSLLLIVLVE TIAVCYVYGL RRFESDLRAM TGRPLNWYWK AMWAFVSPLL 
541:	IIGLFIFYLS DYILTGTLQY QAWDATQGQL VTKDYPPHAL AVIGLLVASS TMCIPLVALG 
601:	TFIRNRLKRG GSSPVA