2.A.68.1.4 YdaH transporter of 492 aas with p-aminobenzoyl-glutamate uptake activity. The crystal structure is known (Bolla et al. 2015). The crystal structure reveals a dimeric molecule with an architecture distinct from other families of
transporters. YdaH is a bowl-shaped dimer with a solvent-filled basin extending from the cytoplasm
to halfway across the membrane bilayer. Each subunit of the transporter contains nine transmembrane
helices and two hairpins that suggest a pathway for substrate transport. YdaH could act as an antibiotic efflux pump and mediate bacterial resistance to
sulfonamide antimetabolite drugs (Bolla et al. 2015). MtrF (TC#2.A.68.1.2) and YdaH as well as the dicarboxylate transporter, INDY
(TC#2.a.47.5.2) have been shown to have similar 3-d folds (Vergara-Jaque et al. 2015), confirming the assignment of these two families to the same superfamily (Prakash et al. 2003).
|
Accession Number: | Q0VR69 |
Protein Name: | YdaH protein |
Length: | 492 |
Molecular Weight: | 51573.00 |
Species: | Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) [393595] |
Number of TMSs: | 12 |
Substrate |
N-(4-aminobenzoyl)-L-glutamate |
---|
1: MTRTHGWLAR LEQLGNRLPH PTLLFVWFCL LLLPLTAVLG ALDVTATHPL TDETITAHSL
61: LDADGLRYLF TTLVGNFTGF APLGVVLVAM LGLGVAEQSG LLSVSLASLV RRSSGGALVF
121: TVAFAGVLSS LTVDAGYVVL IPLAGLVFQL AGRPPIAGIA TAFAAVSGGF SANLLVGPVD
181: ATLAGLSTEA AHIIDPDRTV AATGNYWFII ASTFLVTGLV TLITRTLTEP RLAHANTVAD
241: ASVDAPQIHS RAMKWTGLTL AILLAGLALL VLPNDAPLRH PDTGSVLGSP FIHGLVVIVA
301: LIAGICGAVY GRVSGQFRNS GAVITAMEVT MASMAGYLVL MFFAAQFVAW FNYSQLGLLL
361: AVKGAAWLGA LTVPKVVLLL LFVVLTALIN LMIGSASAKW SILAPVFIPM LMLLGISPEA
421: SQAAYRVGDS STNIITPLMP YFVLVLGFAR RYQPETGIGT LIALMLPYSL TLLLGWSVLL
481: GVWIGFGWPL GP