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Accession Number: | Q03519 |
Protein Name: | TAP2 aka ABCB3 aka PSF2 aka RING11 aka Y1 |
Length: | 686 |
Molecular Weight: | 75664.00 |
Species: | Homo sapiens (Human) [9606] |
Number of TMSs: | 5 |
Location1 / Topology2 / Orientation3: | Endoplasmic reticulum membrane1 / Multi-pass membrane protein2 |
Substrate | peptide |
Cross database links:
DIP: | DIP-322N |
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RefSeq: | NP_000535.3 NP_061313.2 |
Entrez Gene ID: | 6891 |
Pfam: | PF00664 PF00005 |
OMIM: |
170261 gene 604571 phenotype |
KEGG: | hsa:6891 |
Gene Ontology
GO:0030176
C:integral to endoplasmic reticulum membrane
GO:0005634
C:nucleus
GO:0042825
C:TAP complex
GO:0005524
F:ATP binding
GO:0015433
F:peptide antigen-transporting ATPase activity
GO:0046978
F:TAP1 binding
GO:0002489
P:antigen processing and presentation of endo...
GO:0019885
P:antigen processing and presentation of endo...
GO:0046967
P:cytosol to ER transport
GO:0006955
P:immune response
GO:0019060
P:intracellular transport of viral proteins i...
GO:0046968
P:peptide antigen transport
GO:0055085
P:transmembrane transport
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References (21)[1] “DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing.” Beck S.et.al. 1453454 [2] “Polymorphism in a second ABC transporter gene located within the class II region of the human major histocompatibility complex.” Powis S.H.et.al. 1741401 [3] “Two putative subunits of a peptide pump encoded in the human major histocompatibility complex class II region.” Bahram S.et.al. 1946428 [4] “Alleles and haplotypes of the MHC-encoded ABC transporters TAP1 and TAP2.” Powis S.H.et.al. 8428770 [5] “Novel splicing of the human MHC-encoded peptide transporter confers unique properties.” Yan G.et.al. 9916708 [6] “Evolutionary dynamics of non-coding sequences within the class II region of the human MHC.” Beck S.et.al. 8568858 [7] “The DNA sequence and analysis of human chromosome 6.” Mungall A.J.et.al. 14574404 [8] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).” The MGC Project Teamet.al. 15489334 [9] “Novel human TAP2*103 allele shows further polymorphism in the ATP-binding domain.” Cano P.et.al. 7792761 [10] “New TAP2 polymorphisms in Africans.” Tang J.et.al. 9672156 [11] “Polymorphisms in the TAP2 gene and their association with rheumatoid arthritis.” Singal D.P.et.al. 8162639 [12] “Multiple regions of the transporter associated with antigen processing (TAP) contribute to its peptide binding site.” Nijenhuis M.et.al. 8955196 [13] “Molecular mechanism and species specificity of TAP inhibition by herpes simplex virus ICP47.” Ahn K.et.al. 8670825 [14] “The ER-luminal domain of the HCMV glycoprotein US6 inhibits peptide translocation by TAP.” Ahn K.et.al. 9175839 [15] “The human cytomegalovirus gene product US6 inhibits ATP binding by TAP.” Hewitt E.W.et.al. 11157746 [16] “Adenovirus E19 has two mechanisms for affecting class I MHC expression.” Bennett E.M.et.al. 10227971 [17] “Specific targeting of the EBV lytic phase protein BNLF2a to the transporter associated with antigen processing results in impairment of HLA class I-restricted antigen presentation.” Horst D.et.al. 19201886 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MRLPDLRPWT SLLLVDAALL WLLQGPLGTL LPQGLPGLWL EGTLRLGGLW GLLKLRGLLG 61: FVGTLLLPLC LATPLTVSLR ALVAGASRAP PARVASAPWS WLLVGYGAAG LSWSLWAVLS 121: PPGAQEKEQD QVNNKVLMWR LLKLSRPDLP LLVAAFFFLV LAVLGETLIP HYSGRVIDIL 181: GGDFDPHAFA SAIFFMCLFS FGSSLSAGCR GGCFTYTMSR INLRIREQLF SSLLRQDLGF 241: FQETKTGELN SRLSSDTTLM SNWLPLNANV LLRSLVKVVG LYGFMLSISP RLTLLSLLHM 301: PFTIAAEKVY NTRHQEVLRE IQDAVARAGQ VVREAVGGLQ TVRSFGAEEH EVCRYKEALE 361: QCRQLYWRRD LERALYLLVR RVLHLGVQML MLSCGLQQMQ DGELTQGSLL SFMIYQESVG 421: SYVQTLVYIY GDMLSNVGAA EKVFSYMDRQ PNLPSPGTLA PTTLQGVVKF QDVSFAYPNR 481: PDRPVLKGLT FTLRPGEVTA LVGPNGSGKS TVAALLQNLY QPTGGQVLLD EKPISQYEHC 541: YLHSQVVSVG QEPVLFSGSV RNNIAYGLQS CEDDKVMAAA QAAHADDFIQ EMEHGIYTDV 601: GEKGSQLAAG QKQRLAIARA LVRDPRVLIL DEATSALDVQ CEQALQDWNS RGDRTVLVIA 661: HRLQTVQRAH QILVLQEGKL QKLAQL