TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
3.A.22.1.1









The TREX nuclear in RNA export system (Rondón et al., 2010; González-Aguilera et al., 2008; Katahira 2012).

Eukaryota
Fungi, Ascomycota
TREX complex of
Saccharomyces cerevisiae
SAC3 (P46674)
SUS1 (TREX2) (Q6WNK7)
SUB2 ATP-dependent RNA helicase (Yra1) (Q07478)
Mex67 (TAP_C Superfamily)(see 1.I.1; Q99257)
THO subunit 1, THP1 (Q08231)
THO subunit 2, THP2 (P53552)
THO subunit 2', THP2' (O13539)
THO subunit 3, THP3 (Q12049)
THO subunit 7, MFT1 (P33441)
THO subunit HPR1 (P17629)
Yra2, RNA annealing protein; export factor (P36036)
Yra1, RNA annealing protein; export factor (Q12159)
Thp2, O13539
3.A.22.1.2









TREX complex of at least 9 proteins (see below). The functional orchestration of this complex is important for the maintenance of the efficiency and fidelity of gene expression processes. The TREX (TRanscription-EXport) complex is an evolutionarily conserved multicomplex that plays a major role in the functional coupling of different steps during mRNA biogenesis, including mRNA transcription, processing, decay, and nuclear export. Furthermore, studies in mice have revealed that the metazoan TREX complex is required for cell differentiation and development, likely because this complex regulates the expression of key genes (Katahira 2012).

Eukaryota
Metazoa, Chordata
The TREX complex of at least 9 proteins in Homo sapiens Thoc1 (hHpr1), 657 aas, Q96FV9
Thoc2, 1593 aas, Q8NI27
Thoc3, (hTEX1), 351 aas, Q96J01
Thoc4, (Aly) 257 aas, Q86V81
Thoc5, (FMIP), 683 aas, Q13769
Thoc6, 341 aas, Q86W42
Thoc7, (hHPR1), 204 aas, Q6I9Y2
Uap56 interacting protein, 318 aas, Q96QD9
DDX39A. 427 aas, O00148
3.A.22.1.3









TREX complex of at least 8 protein components.

Eukaryota
Metazoa, Arthropoda
TREX complex of Drosophila melanogaster Thoc1 (Hpr1), 701 aas, Q9VNI8
Thoc2, 1641 aas, Q9VQ76
Thoc3, 320 aas, Q9VHT2
Thoc4, (Aly; Yra1), 226 aas, Q12159
Thoc5, 616 aas, Q9W1F4
Thoc6, 350 aas, Q9VTV1
Thoc7, 288 aas, Q8IRJ8
Uap56 interacting protein, 534aas, Q2PNN5