TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
3.A.22.1.1 | The TREX nuclear in RNA export system (Rondón et al., 2010; González-Aguilera et al., 2008; Katahira 2012). | Eukaryota |
Fungi, Ascomycota | TREX complex of Saccharomyces cerevisiae SAC3 (P46674) SUS1 (TREX2) (Q6WNK7) SUB2 ATP-dependent RNA helicase (Yra1) (Q07478) Mex67 (TAP_C Superfamily)(see 1.I.1; Q99257) THO subunit 1, THP1 (Q08231) THO subunit 2, THP2 (P53552) THO subunit 2', THP2' (O13539) THO subunit 3, THP3 (Q12049) THO subunit 7, MFT1 (P33441) THO subunit HPR1 (P17629) Yra2, RNA annealing protein; export factor (P36036) Yra1, RNA annealing protein; export factor (Q12159) Thp2, O13539 |
3.A.22.1.2 | TREX complex of at least 9 proteins (see below). The functional orchestration of this complex is important for the maintenance of the efficiency and fidelity of gene expression processes. The TREX (TRanscription-EXport) complex is an evolutionarily conserved multicomplex that plays a major role in the functional coupling of different steps during mRNA biogenesis, including mRNA transcription, processing, decay, and nuclear export. Furthermore, studies in mice have revealed that the metazoan TREX complex is required for cell differentiation and development, likely because this complex regulates the expression of key genes (Katahira 2012). | Eukaryota |
Metazoa, Chordata | The TREX complex of at least 9 proteins in Homo sapiens
Thoc1 (hHpr1), 657 aas, Q96FV9 Thoc2, 1593 aas, Q8NI27 Thoc3, (hTEX1), 351 aas, Q96J01 Thoc4, (Aly) 257 aas, Q86V81 Thoc5, (FMIP), 683 aas, Q13769 Thoc6, 341 aas, Q86W42 Thoc7, (hHPR1), 204 aas, Q6I9Y2 Uap56 interacting protein, 318 aas, Q96QD9 DDX39A. 427 aas, O00148 |
3.A.22.1.3 | TREX complex of at least 8 protein components. | Eukaryota |
Metazoa, Arthropoda | TREX complex of Drosophila melanogaster
Thoc1 (Hpr1), 701 aas, Q9VNI8 Thoc2, 1641 aas, Q9VQ76 Thoc3, 320 aas, Q9VHT2 Thoc4, (Aly; Yra1), 226 aas, Q12159 Thoc5, 616 aas, Q9W1F4 Thoc6, 350 aas, Q9VTV1 Thoc7, 288 aas, Q8IRJ8 Uap56 interacting protein, 534aas, Q2PNN5 |