TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


9.B.107.1.2
Hypothetical protein (8TMSs)

Accession Number:B0RDT1
Protein Name:Putative integral membrane protein
Length:347
Molecular Weight:35402.00
Species:Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [31964]
Number of TMSs:8
Substrate

Cross database links:

Entrez Gene ID: 6156562   
KEGG: cms:CMS_0604   

References (1)

[1] “Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation.”  Bentley S.D.et.al.   18192393

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MIRRAFGWHR PLMAVAALMV VVAAACLVGG LVGHRVVTGA PVWDKPAKFS LSILVYAVSW 
61:	AWLIARLPRF RRTAHRLGTV VAVALVVEQA VIVGAAAAGT TSHFNVSTPL ATALWAVMAA 
121:	SVTVLYLCTF VTSLTVLRLR LPDKALTLGI RAGALIALVG IGLAYLMTSP TAAQLADFHG 
181:	VVGAHAVGSA DGGPGIPVLG WSTTAGDLRI PHFVGMHALQ LLPVAALLVG AAGRRIPALA 
241:	PDRVRVRLTA IAAVAYLAVI AIVTVQALRG EPVTEPSPMI ATAAVAVAAA SLVAAVAVVL 
301:	RGGGRPATTA PNTDHPHEPH GHGADAPAPT AQPSAASSLA EISSRSK