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9.B.14.3.1
Cytochrome c biogenesis protein, CcsBA (936 aas; 10 TMSs; 14 TMSs predicted by the WHAT program (Frawley and Kranz, 2009).  May be a bifunctional protein with heme transport (export from the cytoplasm to the periplasm) and attachment to apocytochrome c (cytochrome c synthetase) activities.  Two heme binding sites have been identified in a homologue, one in the membrane and one on the external surface (on the periplasmic side of the membrane) (Sutherland et al. 2018). Mendez et al. 2022 described cryo-EM structures of CcsBA, which, as noted above, is a bifunctional heme transporter and cytochrome c (cyt c) synthase. Models built from the cryo-EM densities show that CcsBA is trapped with heme in two conformations, closed and open states. The closed state has heme located solely at a transmembrane (TM) site, with a large periplasmic domain oriented such that access of heme to the cytochrome acceptor is prevented. The open conformation contains two heme moieties, one in the TM-heme site and another in an external site (P-heme site). The presence of heme in the periplasmic site at the base of a chamber induces a large conformational shift that exposes the heme for reaction with apocytochrome c (apocyt c). Consistent with these structures, in vivo and in vitro cyt c synthase studies suggest a mechanism for transfer of the periplasmic heme to cytochrome (Mendez et al. 2022).

Accession Number:Q7VHG9
Protein Name:Cytochrome c biogenesis protein
Length:936
Molecular Weight:106369.00
Species:Helicobacter hepaticus [32025]
Number of TMSs:14
Substrate

Cross database links:

Entrez Gene ID: 1492687   
Pfam: PF01578    PF05140   
KEGG: hhe:HH0998   

Gene Ontology

GO:0016020 C:membrane
GO:0008535 P:respiratory chain complex IV assembly

References (1)

[1] “The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus.”  Suerbaum S.et.al.   12810954

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MMNIIKTLFC SMKMVLLLIG IYATACGIAT FIEKYEGTLA ARLWVYDAFW FEILHIWLVA 
61:	CLIGCFITSK AWQRKKYASL LLHASFIVII IGAGITRYYG FEGLMNLREG QSVNFISTNT 
121:	HYIFIQIKNP QGDVESVRIP TYIDEKVNHK INQHLTFFGK PLTLHTEEFT AKQVNMSELF 
181:	ILNASIDFLG KNEKTLIMRD GNNAPTKENI TMLEIEGYKI FLAWGIDNIA LPFSIKLKKF 
241:	ELERYPGSNS PASYTSEVEV LDGQNPPLPF RIFMNNVLDY GGYRFFQSSY HPDEKGSILS 
301:	VNNDPGKTPT YIGYAMLILG VIWLLFDKNG RFATLGRFLK TQKFFSLMLC SALCYALSSP 
361:	QIAYASTQSQ TDFQPLSENE IPPLQDIPSM IKALADTSSL TNDFDRILVQ DFGGRIKPMH 
421:	TLANEYIHKL TQQRTFKGLN PSQVFLGMLF YPQEWQSIQM IATKSPKLRQ ILGLDENQKH 
481:	IAYIDVFTPQ GQYILQNYVE AANLKSPSLR DTFEKDVISV DERINYAFLI YTGQVLRIFP 
541:	DNKSPNNQWL YPLQAISSAV AQDDTKKAKE LMQIYKKFAQ GMQQGINTHN WQEAAQATRD 
601:	IRTFQQNNGG SLLISPAKVD SEIWLNLYNP FYQLTYPYIF ISIVLFIIVL VGILKNTPTR 
661:	PLIHKVFYIL LFALFILHTC GLGLRWYVSE HAPWSNAYES MLYIAWAAIL SGVVFFRRSN 
721:	LALCASSFLA GMTLFVANLG DMDPQIGNLM PVLKSYWLNI HVSVITASYG FLGLCFMLGL 
781:	ITLIMFLLRN EKRSQVDCSI LSLSALNEMS MILGLFLLSV GNFLGGIWAN ESWGRYWGWD 
841:	SKETWALISI GVYAIILHLR FVVPKNFPFI FASASVIGFF SVLMTYFGVN YYLTGMHSYA 
901:	AGEAEPVPLW VELMVAGIIL LIIIASRKRV LDMPHL