| TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
|---|---|---|---|---|
|
9.B.198.1.1 | LAM1 (YSP1) of 1228 aas and 1 or more TMSs (Wong and Levine 2016). | Eukaryota |
Fungi, Ascomycota | LAM1 of Saccharomyces cerevisiae |
|
9.B.198.1.2 | LAM3 (SIP3) of 1229 aas and 1 or more TMSs. | Eukaryota |
Fungi, Ascomycota | LAM3 of Saccharomyces cerevisiae |
|
9.B.198.1.3 | SipA3 of 482 aas and 0 TMSs | Eukaryota |
Fungi, Ascomycota | SipA of Verticillium alfalfae (Verticillium wilt of alfalfa) (Verticillium albo-atrum) |
|
9.B.198.1.4 | Uncharacterized protein of 1363 aas and 1 or more TMSs | Eukaryota |
Fungi, Mucoromycota | UP of Rhizophagus irregularis (Arbuscular mycorrhizal fungus) (Glomus intraradices) |
|
9.B.198.1.5 | Uncharacterized protein of 1234 aas and 1 or more TMSs | Eukaryota |
Fungi, Mucoromycota | UP of Mucor circinelloides (Mucormycosis agent) (Calyptromyces circinelloides) |
|
9.B.198.2.1 | Membrane-anchored lipid-binding protein YSP2 or LAM2 (also called LTC4) of 1438 aas and 1 or more TMSs. It is involved in induction of programmed cell death in response to reactive oxygen species (ROS) (Sokolov et al. 2006) and may be involved in sterol transfer between intracellular membranes (Gatta et al. 2015). Ergosterol, the major sterol in fungal membranes, is critical for defining membrane fluidity and regulating cellular processes. Ergosterol synthesis is well defined in model yeast. Choy et al. 2023 identified Ysp2 as a retrograde sterol transporter,, in the opportunistic fungal pathogen Cryptococcus neoformans. They found that the lack of Ysp2 under host-mimicking conditions leads to abnormal accumulation of ergosterol at the plasma membrane, invagination of the plasma membrane, and malformation of the cell wall, which can be functionally rescued by inhibiting ergosterol synthesis with the antifungal drug fluconazole. They also observed that cells lacking Ysp2 mislocalize the cell surface protein Pma1 and have thinner and more permeable capsules (Choy et al. 2023). | Eukaryota |
Fungi, Ascomycota | LAM2 or Ysp2 of Saccharomyces cerevisiae |
|
9.B.198.2.2 | LAM4 (LTC3) OF 1345 aas and 1 or more TMSs. | Eukaryota |
Fungi, Ascomycota | LAM4 of Saccharomyces cerevisiae |
|
9.B.198.2.3 | LAM5 (LTC2) of 674 aas and 1 or more TMSs | Eukaryota |
Fungi, Ascomycota | LAM5 of Saccharomyces cerevisiae |
|
9.B.198.2.4 | Membrane-anchored lipid-binding protein, LAM6 or LTC1, of 693 aas and 1 (or more) TMSs (Wong and Levine 2016). It is involved in regulating various organellar membrane contact sites (Elbaz-Alon et al. 2015) and is involved in sterol transfer between intracellular membranes (Gatta et al. 2015). It selectively transports sterols between membranes in vivo and in vitro, and is involved in stress-dependent formation of sterol-enriched vacuolar membrane domains (Murley et al. 2015). | Eukaryota |
Fungi, Ascomycota | LAM6 of Saccharomyces cerevisiae |
|
9.B.198.2.5 | GRAM domain-containing protein 1B, GRAMD1B or ASTER-B, of 738 aas and 1 (or possibly more) TMSs. ASTER-A, B and C (TC#s 9.B.198.2.6, 5 and 7) can form homomeric and heteromeric complexes to move cholesterol and possibly phosphatidyl serine from the plasma membrane to the ER membrane (Naito and Saheki 2021). | Eukaryota |
Metazoa, Chordata | GRAM domain protein 1B of Homo sapiens |
|
9.B.198.2.6 | GRAMD1A or Aster-A of 724 aas and 1 TMS near the C-terminus of the protein. It is a cholesterol transporter that mediates non-vesicular transport of cholesterol from the plasma membrane (PM) to the endoplasmic reticulum (ER) and contains unique domains for binding cholesterol and the PM, thereby serving as a molecular bridge for the transfer of cholesterol from the PM to the ER. It plays a crucial role in cholesterol homeostasis and has the unique ability to localize to the PM based on the level of membrane cholesterol. In lipid-poor conditions, it localizes to the ER membrane, and in response to excess cholesterol in the PM is recruited to the endoplasmic reticulum-plasma membrane contact sites (EPCS) which is mediated by the GRAM domain. At the EPCS, the sterol-binding VASt/ASTER domain binds to the cholesterol in the PM and facilitates its transfer from the PM to ER. It may play a role in tumor progression, and plays a role in autophagy regulation while being required for biogenesis of the autophagosome which requires its cholesterol-transfer activity (Laraia et al. 2019). | Eukaryota |
Metazoa, Chordata | GRAMD1A of Homo sapiens |
|
9.B.198.2.7 | GRAMD1C or Aster-C of 662 aas and 1 very hydrophobic TMS at residue 570, near the C-terminus as well as possibly 1 (small peak of hydrophobicity) at the C-terminus. In lipid-poor conditions, it localizes to the ER membrane, and in response to excess cholesterol in the plasma membrane (PM), it is recruited to the endoplasmic reticulum-plasma membrane contact sites (EPCS). This process is mediated by the GRAM domain. At the EPCS, the sterol-binding VASt/ASTER domain binds to cholesterol in the PM and facilitates its transfer from the PM to the ER.The GRAMDs form homo- and hetero-meric complexes to sense the levels of cholesterol in the PM and regulate transport of accessible PM cholesterol to the ER in order to maintain cholesterol homeostasis (Naito and Saheki 2021). GRAMD1C is reported to be a cholesterol transport protein (Charsou et al. 2023).
| Eukaryota |
Metazoa, Chordata | GRAMD1C of Homo sapiens |