1.B.18 The Outer Membrane Auxiliary (OMA) Protein Family
These proteins are believed to function together with an MPA2 (TC #8.A.4) and ABC- (TC #3.A.1) or an MPA1 (TC #8.A.3) and PST- (TC #2.A.66.2) type exo- or capsular polysaccharide export complex. The OMA proteins are usually of 350-400 amino acyl residues in size although a few are reported to be substantially smaller or larger. They are found exclusively in Gram-negative bacteria, are predicted to consist largely of β-structure and presumably form β-barrel-type porins in the outer membranes of the Gram-negative bacterial envelope. These proteins are in the BexD/CtrA/VexA family of Swiss Prot. In some systems, polysaccharide copolymerases (PCP) and outer membrane polysaccharide exporter (OMA or OPX) proteins interact to form a trans-envelope scaffold for polymer export (Cuthbertson et al., 2009).
One member of the OMA family, WzaK30, has been shown to be required for export of the group 1 K30 capsular polysaccharide, colanic acid, in E. coli strain E69. Mutations in the encoding gene do not interfere with the synthesis or polymerization of the K30 repeat unit but prevent appearance of the polysaccharide on the cell surface. WzaK30 is a surface-exposed outer membrane lipoprotein which forms octomeric ring-like structures resembling the secretins (TC #1.B.22). Mature Wza, the best studied OMA member, is a 359-residue lipoprotein that forms SDS-stable octamers; it is synthesized as a precursor with a cleavable 20-residue amino-terminal signal sequence. Cys 21 is modified by a thioether-linked diacylglyceryl group, and its amino group is acylated. Such structures form the channels through which polysaccharides pass to reach the cell surface from the periplasm. The ring-like homo-octamers (a tetramer of dimers) have an outer diameter of ~9 nm and a central cavity of about 2 nm (Beis et al., 2004; Nesper et al., 2003). The native acylated N-terminus is critical for proper assembly. The Wza octamer forms a complex with Wzc, an inner membrane tyrosine autokinase (Nesper et al., 2003; Reid and Whitfield, 2005).
The 2.26 Å resolution structure of the 340 kDa octamer of Wza was reported by Dong et al. (2006). It reveals a transmembrane region that is a novel α-helical barrel. The bulk of the Wza structure is located in the periplasm and comprises three novel domains forming a large central cavity. Wza is open to the extracellular environment but closed to the periplasm. The route and mechanism for translocation of the capsular polysaccharide were proposed (Dong et al., 2006).
The structural/functional features of Wza have been reviewed and evaluated by Collins and Derrick (2007). This octamer with an 8-fold axis of rotational symmetry is unusual in forming an α-helical barrel structure as noted above. The helices within the barrel are amphipathic: hydrophobic on the outside, to permit interaction with outer membrane lipid, and hydrophilic on the inside. The implication for the function of this α-helical region is clear: the helical cone forms a 'nozzle' that crosses the outer membrane, through which the secreted polysaccharide chains pass to the outside of the cell. The internal diameter of the nozzle is just sufficient to accommodate the capsular polysaccharide in an extended conformation. Interestingly, a 3D electron microscopy structure of a unique complex between Wza and the Wzc inner membrane protein has shown that Wza does indeed change conformation, opening out substantially to form a larger aperture at its base when bound to Wzc (Collins et al., 2007).
Another member of the OMA family, KpsD, has been reported to distribute between the periplasm and the two membranes (Arrecubieta et al., 2001). Together with KpsE (MPA2; TC# 8.A.4), it was suggested to facilitate transport across the periplasm as well as the outer membrane. However, more recently, McNulty et al. (2006) reported that KdpD is an outer membrane protein involved in export of group 2 capsular polysaccharides (CPSs) across this membrane. Interestingly, KdpD, KdpE and the biosynthetic complex comprise a metabolon and are located at the cell poles (McNulty et al., 2006). RhsA is a component of this complex and is required for normal CPS export.
References:
Capsular polysialate exporter component, CtrA. OMA of 3.A.1.101.3 (functions with 3.A.1.101.3 (ABC) and 8.B.4.2.1 (MPA2)) (Larue et al., 2011)
Proteobacteria
CtrA of Neisseria meningitidis (Q547A8)
The OMA capsular polysaccharide exporter of 394 aas, BexD (Kroll et al. 1990).
Proteobacteria
BexD of Haemophilus influenzae
OMA component of the group 1 K30 capsular polysaccharide, colanic acid, export system, Wza (Reid and Whitfield, 2005) (outer membrane porin constituent). The 3-d structure of the Wza/Wzc complex has been solved by Collins et al. (2007). It spans the periplasm, comprising a central constituent for complex formation. The x-ray structure shows an integral outer membrane transmembrane α-helical barrel with a large central cavity, similar to the secretin protein, PilQ (1.B.22.2.1) (Collins and Derrick, 2007). Wza is an octameric α-helical outer membrane channel that directly exports nascent capsular polysaccharide chains through the Wza portal (Nickerson et al. 2014). Peptides based on the C-terminal D4 domain of Wza form transmembrane, ion conducting α-helical barrels. The helix barrel contains eight D4 peptides arranged in parallel (Mahendran et al. 2017).
Proteobacteria
Wza of E. coli (P0A930)
Proteobacteria
The Wza protein, an OMA homologue. May functions with an α-glycosyl transferase, RemC (A5FNG2) which shows limited sequence similarity to the cytoplasmic domain of 2.A.38.4.5, and the Wzc tyrosine protein kinase (8.A.3.3.4) (Shrivastava et al. 2012).
Bacteroidetes
Wza of Flavobactrerium johnsoniae
Outer membrane polysaccharide-specific porin, Wza of 348 aas.
Chlamydiae
Wza of Parachlamydia acanthamoebae
Polysaccharide transmembrane transporter of 741 aas.
Cyanobacteria
PS exporter of Oscillatoria acuminata
Polysaccharide exporter of 680 aas
Planctomycetes
PS exporter of Rhodopirellula sallentina
The outer membrane exo-polysaccharide (xanthan) exporter, GumB of 286 aas (Bianco et al. 2014).
Proteobacteria
GumB of Xanthomonas campestris
Outer membrane auxillary lipoprotein of 698 aas and 1 N-terminal TMS, GlfD or YmcA. Probably involved in capsular polysaccharide export (Peleg et al. 2005; Cuthbertson et al. 2009; Nadler et al. 2012).
GlfD of E. coli
Outer membrane polysaccharide biosynthesis/export protein, Opx, EpsY or MXAN_7417 of 219 aas and 1 N-terminal TMS. The gene encoding this protein is adjacent to EpsZ (MXAN_7415; TC# 9.B.18.1.6), an exopolysaccharide biosynthetic protein, and Wzx (MXAN_7416; TC# 2.A.66.12.12), a polysaccharide cytoplasmic membrane flippase (Pérez-Burgos et al. 2020).
Opx of Myxococcus xanthus