1.E.42 The Putative Holin-like Toxin (Hol-Tox) Family

The Putative Holin-like Toxin family consists of many small proteins (34-48aas) with a single TMSs. Rajesh et al. (2011) identified a holin-like gene from a goat skin surface metagenome and designated it tmp1. It coded for a 34 amino acyl peptide sharing sequence similarity with putative holin-like toxin genes. Following expression in E. coli, Tmp1 exhibited antibacterial activity against Gram-positive bacteria but not to Gram-negative bacteria. A single transmembrane domain (TMD) was identified within Tmp1, and deletion analysis of the N-terminal region and TMD indicated TMD to be responsible for the antibacterial activity. The TMD-dependent antibacterial activity was validated using a synthetic peptide with the amino acid sequence of TMD. Besides antibacterial activity, Tmp1 also complemented the function of holin in a lysis-defective bacteriophage lambda system. To broaden the spectrum of antibacterial activity, a mutant library of tmp1 was generated by random mutagenesis. Four mutants with amino acyl substitutions at the N-terminus of Tmp1 exhibited increased antibacterial activity against Gram-positive and Gram-negative bacteria but were not hemolytic. Improved activity of these mutant proteins was attributed to their increased hydrophobicity.


 

References:

Rajesh, T., T. Anthony, S. Saranya, P.L. Pushpam, and P. Gunasekaran. (2011). Functional characterization of a new holin-like antibacterial protein coding gene tmp1 from goat skin surface metagenome. Appl. Microbiol. Biotechnol. 89: 1061-1073.

Examples:

TC#NameOrganismal TypeExample
1.E.42.1.1

Holin-like antibacterial protein of 34aas and 1 TMS. Antibacterial and holin activities have been demonstrated (Rajesh et al. 2011).

Uncultured organism

Antibacterial protein of unknown source (B5M446)

 
1.E.42.1.2

Putative holin-like toxin of 34aas and 1 TMS

Firmicutes

Holin-like toxin of Leuconostoc carnosum (K0DCD3)

 
1.E.42.1.3

Predicted holin-like toxin of 45aas and 1 TMSs

Firmicutes

Holin-like toxin of Lactobacillus casei (Q03BM3) 

 
1.E.42.1.4

Uncharacterized protein of 34aas and 1 TMS

Actinobacteria

Putative protein of Scardovia inopinata (D6KVW0)

 
1.E.42.1.5

Putative holin of 80 aas and 1 C-terminal TMS.

Holin of Enterococcus faecalis

 
1.E.42.1.6

Putative holin of 48 aas and 1 C-terminal TMS

Holin of Abiotrophia defectiva

 
1.E.42.1.7

Holin-like toxin of 49 aas and 1 TMS.

Holin of Staphylococcus pseudintermedius