1.E.62.  The Putative Firmicute Phage Holin (YvrJ) Family

The YvrJ putative holin family is a very large family of small proteins, all of which have a single N-terminal TMS.  Most are of between 40 and 60 aas in length.  They have been annotated as holins, but most are annotated as members of the YvrJ family

 


Examples:

TC#NameOrganismal TypeExample
1.E.62.1.1

Putative holin of 49 aas and 1 N-terminal TMS

Holin of Bacillus phage VioletteMad

 
1.E.62.1.2

Putative holin; member of the YvrJ family

YvrJ family protein of Caldanaerobius fijiensis

 
1.E.62.1.3

Putative holin, member of the YvrJ family, of 60 aas and 1 N-terminal TMS

YvrJ family protein of Carnobacterium alterfunditum

 
1.E.62.1.4

YvrJ family protein of 50 aas and 1 TMS

YvrJ protein of Peptoanaerobacter stomatis

 
1.E.62.1.5

Uncharacterized YvrJ family protein of 60 aas and 1 TMS

UP of Pelotomaculum schinkii

 
1.E.62.1.6

Uncharacterized YvrJ family protein of 48 aas and 1 TMS

UP of Kurthia zopfii

 
1.E.62.1.7

Uncharacterized YvrJ family protein of 71 aas and 1 N-terminal TMS

YvrJ family protein of Aminomonas paucivorans

 
1.E.62.1.8

Uncharacterized YvrJ family member of 49 aas and 1 TMS

UP of Selenomonas ruminantium