1.V.1. The Filamentous Cyanobacterial Septal Pore (C-Septum) Family
In the diazotrophic filaments of heterocyst-forming cyanobacteria, two different cell types, the CO2-fixing vegetative cells and the N2-fixing heterocysts, exchange nutrients, including some amino acids. In Anabaena sp. strain PCC 7120, the SepJ protein, composed of periplasmic and integral membrane (permease) sections, is located at the intercellular septa joining adjacent cells in the filament. The unicellular cyanobacterium Synechococcus elongatus strain PCC 7942 bears a gene, Synpcc7942_1024 (dmeA), encoding a permease homologous to the SepJ permease domain. Synechococcus strains lacking dmeA or lacking dmeA and expressing Anabaena sepJ have been constructed (Escudero et al. 2015). The Synechococcus dmeA mutant showed a 22 to 32% decrease in the uptake of aspartate, glutamate, and glutamine, a phenotype that could be partially complemented by Anabaena sepJ. Synechococcus mutants of an ATP-binding-cassette (ABC)-type transporter for polar amino acids showed >98% decreased uptake of glutamate irrespective of the presence of dmeA or Anabaena sepJ in the same strain. Thus, Synechococcus DmeA or Anabaena SepJ is needed to observe full activity of the ABC transporter. An Anabaena sepJ deletion mutant was impaired in glutamate and aspartate uptake, which also in this cyanobacterium, requires the activity of an ABC-type transporter for polar amino acids. SepJ appears therefore to generally stimulate the activity of cyanobacterial ABC-type transporters for polar amino acids. Conversely, an Anabaena mutant of three ABC-type transporters for amino acids was impaired in the intercellular transfer of 5-carboxyfluorescein, a SepJ-related property (Escudero et al. 2015).
Nitrogen fixation in these complex multicellular bacteria depends on metabolite exchange between the two cell types, with the heterocysts supplying combined-nitrogen compounds but dependent on the vegetative cells for photosynthetically produced carbon compounds. Nürnberg et al. 2015 used a fluorescent tracer to probe intercellular metabolite exchange in the filamentous heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. They showed that esculin, a fluorescent sucrose analog, is incorporated by a sucrose import system into the cytoplasm of Anabaena cells, and the cytoplasmic esculin is rapidly and reversibly exchanged across vegetative-vegetative and vegetative-heterocyst cell junctions. This intercellular metabolic communication was lost in older heterocysts. SepJ, FraC, and FraD are proteins located at the intercellular septa and may form structures analogous to gap junctions. A ΔsepJ ΔfraC ΔfraD triple mutant showed an altered septum structure with thinner septa but a denser peptidoglycan layer. Intercellular diffusion of esculin and fluorescein derivatives was impaired in this mutant, which also showed a greatly reduced frequency of nanopores in the intercellular septal cross walls. FraC, FraD, and SepJ may be important for the formation of junctional structures that constitute the major pathway for feeding heterocysts with sucrose (Nürnberg et al. 2015). In addition, two proteins, AmiC1 and AmiC2 of Anabaena PCC7120l, which perforate the septal peptidoglycan, crating an array ofnanopores, may provide the framework for septal junction formation because they are required for intercellular communication (Bornikoel et al. 2017).
Heterocyst-forming cyanobacteria grow as chains of cells (filaments or trichomes) in which the cells exchange regulators and nutrients. Flores et al. 2018 reviewed the morphological, physiological and genetic data that have led to an understanding of intercellular communication in these organisms. Intercellular molecular exchange appears to take place by simple diffusion through proteinaceous septal junctions, which connect the adjacent cells in the filament and traverse the septal peptidoglycan through perforations known as nanopores. Proteins that are necessary to produce, and that may be components of, the septal junctions - SepJ, FraC and FraD - have been identified in the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120 model. Additionally, several proteins that are necessary to produce a normal number of nanopores and functional septal junctions have been identified, including AmiC-type amidases, peptidoglycan-binding proteins and some membrane transporters. Septal junctions may be regulated, possibly by a gating mechanism (Flores et al. 2018).
References:
Cyanobacterial septa (also called microplasmodesmata) between vegetative cells and between vegetative cells and N2-fixing heterocysts that appear to include at least 3 proteins: SepJ, which is a member of the DMT superfamily (2.A.7.3.81) and seems to transport acidic amino acids and other hydrophilic amino acids, as well as FraC, and FraD which seem to be cyanobacterium-specific (Nürnberg et al. 2015). FraC and FraD each have 4 or 5 and 5 TMSs, respectively, and are encoded in a single operon, fraCDE. The septa have a mean diameter of about 7 - 8 nm with varying numbers of nanopores (holes in the peptidoglycan) (Flores et al. 2018). Each septa has a cap and a cyanophycin plug as well as a cytoplasmic membrane-anchored tube crossing the intercellular space between cells. The AmiC amidase may drill holes in the peptidoglycan druing septal biogenesis to generate the nanopores. The septa can transport a variety of sugars, amino acids, peptides and 5-carboxyflorescein. Proteins that affect nanopore formation include the product of the alr3353 gene (SjcF1; 760 aas; a peptidoglycan binding protein LytM-like factor) which is homologous to B. subtilis proteins in gap junction-like structures (TC# 1.A.34.1.1-3) and the SpoIIA-SpoQ2 complex (TC# 9.B.70.1.1) (Flores et al. 2018).
The septum proteins, FraC, FraD and SepJ of Anabaena (Nostoc) sp. strain PCC 7120
FraC, 179 aas and 4 or 5 TMSs, P46078
FraD, 343 aas and 5 TMSs, P46079
SepJ, see 2.A.7.3.81
FraCD/SepJ with FraC of 172 aas with 4 TMSs, FraD of 193 aas with 5 TMSs, and SepJ (DUF6) of 566 aas with 10 C-terminal TMSs and a long N-terminal hydrophilic domain.
FraCD/SepJ of Arthrospira platensis (Spirulina platensis)
FraCD/SepJ; FraC, 194 aas with 4 or 5 TMSs; FraD, 180 aas with 4 TMSs; and SepJ, 431 aas with 10 TMSs. SepJ is a DMT superfamiy member.
FraCD/SepJ of Roseofilum reptotaenium
FraC, OJJ18935, 194 aas with 4 or 5 TMSs
FraD, OFF18936, 180 aas with 4 TMSs
SepJ, OJJ22670, 431 aas with 10 C-terminal TMSs