8.B.43.  The Bacteriocin Immunity Protein (BIP) Family 

Pediocin-like bacteriocins, also designated class IIa bacteriocins, are ribosomally synthesized antimicrobial peptides targeting species closely related to the producers. They act on the cytoplasmic membranes of Gram-positive cells by dissipating the transmembrane electrical potential through pore formation with the mannose phosphotransferase system (man-PTS) as the target/receptor. Bacteriocin-producing strains also synthesize a cognate immunity protein that protects them against their own bacteriocins. Zhu et al. 2022 reported the cryo-EM structure of the bacteriocin-receptor-immunity ternary complex from Lactobacillus sakei. The complex structure reveals that pediocin-like bacteriocins bind to the same position on the Core domain of the man-PTS, while the C-terminal helical tails of bacteriocins delimit the opening range of the Core domain away from the V-motif domain to facilitate transmembrane pore formation. Upon attack of bacteriocins from the extracellular side, the man-PTS exposes its cytosolic side for recognition of the N-terminal four-helix bundle of the immunity protein. The C-terminal loop of the immunity protein then inserts into the pore and blocks leakage induced by bacteriocins (Zhu et al. 2022).


 

References:

Zhu, L., J. Zeng, and J. Wang. (2022). Structural Basis of the Immunity Mechanisms of Pediocin-like Bacteriocins. Appl. Environ. Microbiol. 88: e0048122.

Examples:

TC#NameOrganismal TypeExample
8.B.43.1.1

Bacteriocin Immunity Protein, BIP, of 115 aas and 0 TMSs (Zhu et al. 2022). 

BIP of Latilactobacillus sakei subsp. sakei

 
8.B.43.1.2

Bacteriocin immunity protein, BIP, of 80 aas.

BIP of Enterococcus saccharolyticus

 
8.B.43.1.3

Bacteriocin immunity protein, BIP, partial, of 81 aa

BIP of Enterococcus faecium

 
8.B.43.1.4

Bacteriocin Immunity Protein, BIP, of 136 aas with 0 TMSs.

BIP of Periweissella cryptocerci

 
8.B.43.1.5

BIP of 71 aas

BIP of Clostridium roseum

 
8.B.43.1.6

BIP of 103 aas

BIP of Loigolactobacillus zhaoyuanensis

 
8.B.43.1.7

BIP of 118 aas

BIP of Lactiplantibacillus songbeiensis