TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.I.1.1.4
Ciliate nucleopore complex, NPC.  Regulates protein import and nuclear division (Malone et al. 2008). The NPC contributes to nucleus-selective transport in ciliates (Iwamoto et al. 2009).  The transmembrane components, Pom121 and Pom82, localize exclusively to the macro (MAC)- and micro (MIC)-nuclear NPCs, respectively. Functional nuclear dimorphism in ciliates is likely to depend on compositional and structural specificity of the NPCs (Iwamoto et al. 2017).

Accession Number:D3KYT8
Protein Name:Micronuclear nucleoporin MicNup98A
Length:942
Molecular Weight:110638.00
Species:Tetrahymena thermophila [5911]
Substrate molecule, protein polypeptide chain, (ribonucleotide)n+m

Cross database links:

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MYGYQNVYNP YMSNSQQQYG YPQNMNPYNN PQYMTEQQYQ NQNQMNYLAN GVYNNNMNRS 
61:	VQQIPNQNIF QSNNQNVMNS NPINPIVASR MNRQTSNPVG GSGNQNNQMN RNMYASYNNA 
121:	NPIFNQNQVN NNNMYYNNSN QTANFGQNTQ GYYNNQNINN QSIFNGNNNT QRNFNNQNQS 
181:	IFNNNNNNTN NNLNIFSNSN NNQNVFNNTN NSQNIFKNNN NNNNQSNFNN NNSSIFNNNN 
241:	NGNNQNIFSK NNNNNQSIFN NNNNNNNNNI FKSSNNNQNI FSSNNNNNNN SSIFNNTNQS 
301:	ILNNNSSIFN NSNNQSIFNN SMNNNLNVNR SNNQSIFNNN NNNNTIQNVF NQPNSILNQP 
361:	NQTQSIFGNA PNLLEVINYM PPTSIFDTQN SLLKYTPKIR LANMSPFRTN NQPYYGQGNN 
421:	LIPQFNNKLV LPPPKRLQVK RVANTFIDQK GDLTQDQKQF LNDRLIRPQS TKSFFSEKKP 
481:	TGILKNSNMI INLRRNSEDL QQSNSGNAAE QKSIHNLNNS LLNMEDEKKK KQQIKELFPG 
541:	LYNQNRLWND LKRQSLNKQE QNVKKKYQFL YEMEQDPNSE FYLPRRKALM EEQMRQRGIQ 
601:	LQQEAQENGN HPFDKDRKHI EEFETEEEVE QERQFYREYL DSHNEGLMDL NILAKCTKKL 
661:	LDLEKWKEEL AKQRKYEKFG FGLFKYEMKR EFAFVSVICH VTNISTQKSE EIDQLQKVQF 
721:	KLTDTIQQII SDHYQKHILK SGLIWHRDYD ELIGKNATYI DTDGKIVALT PIEKSLKDFK 
781:	VTNKGKIIIE IFVSEAPVLK NDKYKCSPSV YEMRHWPIEE LQSVNQFIIQ NQYGKIEFEN 
841:	PVEITRQDLD KIVIIEQQRA IVYPEHLYSG KCPKVGCKLN QQAVVTLYCI DKKAFEEHRQ 
901:	KTIDYEKLER KLKKQCEKNK CEYVNFDRKK FWFSFRVFDW SC