TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.I.1.1.2
Fungal Nuclear Pore Complex (NPC) with 29 components.  Stuwe et al. 2015 presented the reconstitution of the ~425-kilodalton inner ring complex (IRC), which forms the central transport channel and diffusion barrier of the NPC, revealing its interaction network and equimolar stoichiometry. The Nsp1•Nup49•Nup57 channel nucleoporin heterotrimer (CNT) attaches to the IRC solely through the adaptor nucleoporin Nic96. The CNT•Nic96 structure reveals that Nic96 functions as an assembly sensor that recognizes the three-dimensional architecture of the CNT, thereby mediating the incorporation of a defined CNT state into the NPC. They proposed that the IRC adopts a relatively rigid scaffold that recruits the CNT to primarily form the diffusion barrier of the NPC, rather than enabling channel dilation (Stuwe et al. 2015 presented the reconstitution of the ~425-kilodalton inner ring complex (IRC), which forms the central transport channel and diffusion barrier of the NPC, revealing its interaction network and equimolar stoichiometry. The Nsp1•Nup49•Nup57 channel nucleoporin heterotrimer (CNT) attaches to the IRC solely through the adaptor nucleoporin Nic96. The CNT•Nic96 structure reveals that Nic96 functions as an assembly sensor that recognizes the three-dimensional architecture of the CNT, thereby mediating the incorporation of a defined CNT state into the NPC. They proposed that the IRC adopts a relatively rigid scaffold that recruits the CNT to primarily form the diffusion barrier of the NPC, rather than enabling channel dilation (Stuwe et al. 2015).

Accession Number:G0SDP9
Protein Name:Nucleoporin NUP152
Length:1463
Molecular Weight:152244.00
Species:Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) [759272]
Location1 / Topology2 / Orientation3: Nucleus1
Substrate protein polypeptide chain, (ribonucleotide)n+m

Cross database links:

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MDPPSKKRSI FGGITSLFRS STAPPEDRKG KSTNSNSVTA NAPSLPPPQP ESNGASSPFS 
61:	PAKRASEAQL SVRKIIPKPQ GPSSKLSQSV SASEIAHRPA PSTPAPAAAT PVPKRRPGDN 
121:	PHKLAASTST PALQNLPNPP APATSSKATS FSGAPSTPRP SIFRNSLYAR PAPATTYTQR 
181:	VSSHPLTQSF PPVTPGRPGR AANVDINNRI LSNTASTELF PMKIPEPPRH LTGEMLAKEV 
241:	PEDPNRAGSI YADEYLAHLC PPEFDDLQRR QFFCILDLRR LKYAADEVFL KKDWKINILN 
301:	FAKEYEKSRS LIMLRYGLYE FKTVRASEAV KREWKLKHGI PDSDDESGAP AKTNGGGKRK 
361:	AEEDLEPSSS TFTHTASPNK RARATEAPAT NKRKANDELE EESQPSKLQK PGSPSPAKTP 
421:	SATKSVFESI ANKTASPQTA PKSSLFSSST AAKPNGSIFD NAQKTPATSS NIFGHLSDAS 
481:	KDEDNESDTG SEAEAEDETP AKKKKKTTVN GASSSAPSEG GESTQSRSIF DRITRDANGQ 
541:	PVRQLPEGGL FSGESRKRSL SPVKELPANN TWNASAGIKF ATPGTSSIFG SSNPKPPATT 
601:	DTIDFAASTT KKPEEAAAPA EAPKEATPTT NLFGAQTKAT EEAPKPAATN IFGSTTNPTE 
661:	TSIPAGSLFS AKPATSTTNS LFGATTSAAG QKKDEESKPT EAAPAPAPAT STLFGAKPAT 
721:	TESPKTNLFQ FGTPNKTETA PATQPQFGGL FGKPPSTETP TEKPATTSLF GTDASKPATT 
781:	SSLFGSATTA ADKPAATNLF GSTTTPADKP TTTNLFGSTS TQATSGSDEP TAKKFAFGGT 
841:	TESKPTTSLF GSTTPAPATS TENKGGLFGA TTTSATPATN TKPLFGSTPA PAQENKPLFG 
901:	SSTTTAAPVF QFGSTPASTS TEQKPLFGAT AATDSKPLFG STSATSTEQK PLFGSSTTMT 
961:	EQKPLFGSIS TTATEQKPLF GSTSTTEAKP LFGAAPASTE QKSLFGITPS TTENNPASIF 
1021:	GNSSTSTEQK PLFGSAPAST EQKPLFGSTP STTENKPAGL FGNTSTTSTS TPLFNFGSQN 
1081:	TTASQPSTTG SIFGSASASF TFTAGGSDGT IKNPFASDGS YSAPTSFNFG SGDSQSSSAP 
1141:	FTFGAGGGTP SFTFGASSDS SNASNNASSA PIFSFGASQP SSTPLFGQNN PPAASNIFAS 
1201:	SLAPVGGTST GTSKHVPSFL ESENKASAYS SLDSPFTFGG ASSLATTPAA STPEPSAANA 
1261:	AAAGEDQGAS ADADEQPQEQ ISLTDGGPGE EDESVVHEVR AKAVKLVTAA DSSADSSNGS 
1321:	GEKPAEKKSN SPWKVMGVGP LRLLKHKQTG AVRMLLRAEP RGNIALNKLV LPQFTYKPDA 
1381:	ATPKFIKFAA ARDDGKGLET WMIQVKTPQL AQELAAALEE HKKANEKKDG EKNEESEKKD 
1441:	EKQEEKKNEE KKDEKEEKKD EKK