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Accession Number: | P34077 |
Protein Name: | Nucleoporin NIC96 |
Length: | 839 |
Molecular Weight: | 96174.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-745N DIP-745N DIP-745N DIP-745N |
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RefSeq: | NP_116657.1 |
Entrez Gene ID: | 850552 |
Pfam: | PF04097 |
KEGG: | sce:YFR002W sce:YFR002W sce:YFR002W sce:YFR002W |
Gene Ontology
GO:0055125
C:Nic96 complex
GO:0031965
C:nuclear membrane
GO:0005515
F:protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0051028
P:mRNA transport
GO:0006606
P:protein import into nucleus
GO:0000055
P:ribosomal large subunit export from nucleus
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References (80)[1] “Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.” Grandi P.et.al. 7688296 [2] “Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae.” Murakami Y.et.al. 7670463 [3] “Sequencing of a 23 kb fragment from Saccharomyces cerevisiae chromosome VI.” Naitou M.et.al. 8789262 [4] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [5] “Functional interaction of Nic96p with a core nucleoporin complex consisting of Nsp1p, Nup49p and a novel protein Nup57p.” Grandi P.et.al. 7828598 [6] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [7] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [8] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [9] “Nup192p is a conserved nucleoporin with a preferential location at the inner site of the nuclear membrane.” Kosova B.et.al. 10428845 [10] “Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p.” Kosova B.et.al. 10617624 [11] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [12] “Yeast nuclear pore complex assembly defects determined by nuclear envelope reconstruction.” Gomez-Ospina N.et.al. 11121302 [13] “Comparative spatial localization of protein-A-tagged and authentic yeast nuclear pore complex proteins by immunogold electron microscopy.” Fahrenkrog B.et.al. 10806080 [14] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [15] “Karyopherins in nuclear pore biogenesis: a role for Kap121p in the assembly of Nup53p into nuclear pore complexes.” Lusk C.P.et.al. 12403813 [16] “In situ analysis of spatial relationships between proteins of the nuclear pore complex.” Damelin M.et.al. 12496130 [17] “Nuclear accumulation of the small GTPase Gsp1p depends on nucleoporins Nup133p, Rat2p/Nup120p, Nup85p, Nic96p, and the acetyl-CoA carboxylase Acc1p.” Gao H.et.al. 12730220 [18] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [19] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [20] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [21] “Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.” Grandi P.et.al. 7688296 [22] “Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae.” Murakami Y.et.al. 7670463 [23] “Sequencing of a 23 kb fragment from Saccharomyces cerevisiae chromosome VI.” Naitou M.et.al. 8789262 [24] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [25] “Functional interaction of Nic96p with a core nucleoporin complex consisting of Nsp1p, Nup49p and a novel protein Nup57p.” Grandi P.et.al. 7828598 [26] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [27] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [28] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [29] “Nup192p is a conserved nucleoporin with a preferential location at the inner site of the nuclear membrane.” Kosova B.et.al. 10428845 [30] “Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p.” Kosova B.et.al. 10617624 [31] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [32] “Yeast nuclear pore complex assembly defects determined by nuclear envelope reconstruction.” Gomez-Ospina N.et.al. 11121302 [33] “Comparative spatial localization of protein-A-tagged and authentic yeast nuclear pore complex proteins by immunogold electron microscopy.” Fahrenkrog B.et.al. 10806080 [34] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [35] “Karyopherins in nuclear pore biogenesis: a role for Kap121p in the assembly of Nup53p into nuclear pore complexes.” Lusk C.P.et.al. 12403813 [36] “In situ analysis of spatial relationships between proteins of the nuclear pore complex.” Damelin M.et.al. 12496130 [37] “Nuclear accumulation of the small GTPase Gsp1p depends on nucleoporins Nup133p, Rat2p/Nup120p, Nup85p, Nic96p, and the acetyl-CoA carboxylase Acc1p.” Gao H.et.al. 12730220 [38] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [39] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [40] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [41] “Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.” Grandi P.et.al. 7688296 [42] “Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae.” Murakami Y.et.al. 7670463 [43] “Sequencing of a 23 kb fragment from Saccharomyces cerevisiae chromosome VI.” Naitou M.et.al. 8789262 [44] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [45] “Functional interaction of Nic96p with a core nucleoporin complex consisting of Nsp1p, Nup49p and a novel protein Nup57p.” Grandi P.et.al. 7828598 [46] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [47] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [48] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [49] “Nup192p is a conserved nucleoporin with a preferential location at the inner site of the nuclear membrane.” Kosova B.et.al. 10428845 [50] “Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p.” Kosova B.et.al. 10617624 [51] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [52] “Yeast nuclear pore complex assembly defects determined by nuclear envelope reconstruction.” Gomez-Ospina N.et.al. 11121302 [53] “Comparative spatial localization of protein-A-tagged and authentic yeast nuclear pore complex proteins by immunogold electron microscopy.” Fahrenkrog B.et.al. 10806080 [54] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [55] “Karyopherins in nuclear pore biogenesis: a role for Kap121p in the assembly of Nup53p into nuclear pore complexes.” Lusk C.P.et.al. 12403813 [56] “In situ analysis of spatial relationships between proteins of the nuclear pore complex.” Damelin M.et.al. 12496130 [57] “Nuclear accumulation of the small GTPase Gsp1p depends on nucleoporins Nup133p, Rat2p/Nup120p, Nup85p, Nic96p, and the acetyl-CoA carboxylase Acc1p.” Gao H.et.al. 12730220 [58] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [59] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [60] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [61] “Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.” Grandi P.et.al. 7688296 [62] “Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae.” Murakami Y.et.al. 7670463 [63] “Sequencing of a 23 kb fragment from Saccharomyces cerevisiae chromosome VI.” Naitou M.et.al. 8789262 [64] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [65] “Functional interaction of Nic96p with a core nucleoporin complex consisting of Nsp1p, Nup49p and a novel protein Nup57p.” Grandi P.et.al. 7828598 [66] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [67] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [68] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [69] “Nup192p is a conserved nucleoporin with a preferential location at the inner site of the nuclear membrane.” Kosova B.et.al. 10428845 [70] “Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p.” Kosova B.et.al. 10617624 [71] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [72] “Yeast nuclear pore complex assembly defects determined by nuclear envelope reconstruction.” Gomez-Ospina N.et.al. 11121302 [73] “Comparative spatial localization of protein-A-tagged and authentic yeast nuclear pore complex proteins by immunogold electron microscopy.” Fahrenkrog B.et.al. 10806080 [74] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [75] “Karyopherins in nuclear pore biogenesis: a role for Kap121p in the assembly of Nup53p into nuclear pore complexes.” Lusk C.P.et.al. 12403813 [76] “In situ analysis of spatial relationships between proteins of the nuclear pore complex.” Damelin M.et.al. 12496130 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MLETLRGNKL HSGTSKGANK KLNELLESSD NLPSASSELG SIQVSINELR RRVFQLRSKN 61: KASKDYTKAH YLLANSGLSF EDVDAFIKDL QTNQFLEPNP PKIIESEELE FYIRTKKEEN 121: ILMSIEQLLN GATKDFDNFI NHNLNLDWAQ HKNEVMKNFG ILIQDKKTVD HKKSISSLDP 181: KLPSWGNKGN NILNSNESRL NVNENNILRE KFENYARIVF QFNNSRQANG NFDIANEFIS 241: ILSSANGTRN AQLLESWKIL ESMKSKDINI VEVGKQYLEQ QFLQYTDNLY KKNMNEGLAT 301: NVNKIKSFID TKLKKADKSW KISNLTVING VPIWALIFYL LRAGLIKEAL QVLVENKANI 361: KKVEQSFLTY FKAYASSKDH GLPVEYSTKL HTEYNQHIKS SLDGDPYRLA VYKLIGRCDL 421: SRKNIPAVTL SIEDWLWMHL MLIKEKDAEN DPVYERYSLE DFQNIIISYG PSRFSNYYLQ 481: TLLLSGLYGL AIDYTYTFSE MDAVHLAIGL ASLKLFKIDS STRLTKKPKR DIRFANILAN 541: YTKSFRYSDP RVAVEYLVLI TLNEGPTDVE LCHEALRELV LETKEFTVLL GKIGRDGARI 601: PGVIEERQPL LHVRDEKEFL HTITEQAARR ADEDGRIYDS ILLYQLAEEY DIVITLVNSL 661: LSDTLSASDL DQPLVGPDDN SETNPVLLAR RMASIYFDNA GISRQIHVKN KEICMLLLNI 721: SSIRELYFNK QWQETLSQME LLDLLPFSDE LSARKKAQDF SNLDDNIVKN IPNLLIITLS 781: CISNMIHILN ESKYQSSTKG QQIDSLKNVA RQCMIYAGMI QYRMPRETYS TLINIDVSL