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Accession Number: | P39685 |
Protein Name: | Nucleoporin POM152 |
Length: | 1337 |
Molecular Weight: | 151653.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Number of TMSs: | 3 |
Location1 / Topology2 / Orientation3: | Nucleus1 / Single-pass type II membrane protein2 |
Substrate |
Cross database links:
DIP: | DIP-1520N DIP-1520N DIP-1520N DIP-1520N |
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RefSeq: | NP_013848.1 |
Entrez Gene ID: | 855159 |
KEGG: | sce:YMR129W sce:YMR129W sce:YMR129W sce:YMR129W |
Gene Ontology
GO:0005739
C:mitochondrion
GO:0070762
C:NDC1 complex
GO:0031965
C:nuclear membrane
GO:0005515
F:protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0005641
C:nuclear envelope lumen
GO:0043495
F:protein anchor
GO:0051028
P:mRNA transport
GO:0006606
P:protein import into nucleus
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References (56)[1] “POM152 is an integral protein of the pore membrane domain of the yeast nuclear envelope.” Wozniak R.W.et.al. 8138573 [2] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [3] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [4] “Topology and functional domains of the yeast pore membrane protein Pom152p.” Tcheperegine S.E.et.al. 9988776 [5] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [6] “A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope.” Marelli M.et.al. 11352933 [7] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [8] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [9] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [10] “A global topology map of the Saccharomyces cerevisiae membrane proteome.” Kim H.et.al. 16847258 [11] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [12] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [13] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [14] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [15] “POM152 is an integral protein of the pore membrane domain of the yeast nuclear envelope.” Wozniak R.W.et.al. 8138573 [16] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [17] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [18] “Topology and functional domains of the yeast pore membrane protein Pom152p.” Tcheperegine S.E.et.al. 9988776 [19] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [20] “A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope.” Marelli M.et.al. 11352933 [21] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [22] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [23] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [24] “A global topology map of the Saccharomyces cerevisiae membrane proteome.” Kim H.et.al. 16847258 [25] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [26] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [27] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [28] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [29] “POM152 is an integral protein of the pore membrane domain of the yeast nuclear envelope.” Wozniak R.W.et.al. 8138573 [30] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [31] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [32] “Topology and functional domains of the yeast pore membrane protein Pom152p.” Tcheperegine S.E.et.al. 9988776 [33] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [34] “A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope.” Marelli M.et.al. 11352933 [35] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [36] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [37] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [38] “A global topology map of the Saccharomyces cerevisiae membrane proteome.” Kim H.et.al. 16847258 [39] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [40] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [41] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [42] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [43] “POM152 is an integral protein of the pore membrane domain of the yeast nuclear envelope.” Wozniak R.W.et.al. 8138573 [44] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [45] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [46] “Topology and functional domains of the yeast pore membrane protein Pom152p.” Tcheperegine S.E.et.al. 9988776 [47] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [48] “A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope.” Marelli M.et.al. 11352933 [49] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [50] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [51] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [52] “A global topology map of the Saccharomyces cerevisiae membrane proteome.” Kim H.et.al. 16847258 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MEHRYNVFND TPRGNHWMGS SVSGSPRPSY SSRPNVNTTR RFQYSDDEPA EKIRPLRSRS 61: FKSTESNISD EKSRISERDS KDRYINGDKK VDIYSLPLIS TDVLEISKQR TFAVILFLII 121: QCYKIYDLVI LKSGLPLSGL LFKNYRFNFI SKYFIIDSFF LYVLPSFNIP RLTFKPWVVY 181: LQILAMLLLN IFISSDHEFV LISLIMTTWR KLYTKELSVT GSAINHHRIF DSSAHFKGAL 241: TIKILPENTA MFNPLHESYC LPMDTNLFKI NSIDVPIRIN STEEIEYIEL EYRDLYTNSV 301: ELRSLSKKDF KIIDNPKSFL KKDQSVLKSH SNDFEEGSTI RYLAVTLQDI GFYQIKKIVD 361: SKKLNLKIHQ SHLVVPYCPI ASITGTGSND RCIGDSDNVS FEIQGVPPMK LAYSKIVNGQ 421: TFSYVDSSLQ PEYFESPLQS SKSKQSFTQG ELNDLKWGRN QPVNINLDSS ITQDGKFAYK 481: IDKITDGLGN VVDFTSLPEE LKKRYDLSYN FNVHEVPRAA LEERFDPKSP TKRSIAIVFE 541: EIKNWISDIP YVISLSYTDA QDKSKKIMNV TTDSLTKVLQ ADLPGSYNLE YIESKFCPGE 601: IVGKSNVLVT MPVAPTMEVK SFPILDQCVG QVGLNFELSF TGAPPYYYNT KIYKLENGER 661: KLYDAKRYTS EGTRNRFSYS PPKEGNYEIV FDTVSNKLFT EPIKLEPVKE YTFKTSMRVK 721: PSASLKLHHD LKLCLGDHSS VPVALKGQGP FTLTYDIIET FSSKRKTFEI KEIKTNEYVI 781: KTPVFTTGGD YILSLVSIKD STGCVVGLSQ PDAKIQVRRD IPSAAFNFFE PIKEAKIKHG 841: SVTEIPLKLS GEGPFTVKFK HMDYDGNIVK EFENKFQNSY KPALKVSKEG LYQLVDIRDS 901: SCQGNVIYRN SLYKVSFLEK PKFAIQDNHH ITKVTENLFS KEEVCQGMEG TVDLALFGSP 961: PFILEYDLMA PNGHISTKKI QVATKYASLK LPNQIPGEYI TTIKAIFDGN YGESDIHFRE 1021: HQSELIIKQT VHPIPDVAFA DGGKTLRACA ANVDQISFLE PINLKFLQGE SPFSITFSVY 1081: HESTSRTDQY TIDNIDSENF SFEKLYEGMK LGNHAITIDS VVDANGCVNS LISGPRNQIL 1141: VSITDAPKIH ILDPSTEYCV GDYVAYQLNG VAPFMIKYEF NGIPLKSKER SSQFVRLASE 1201: PGIISITSLQ DSSSQCIVDF TNPKLKSEFD DLSLNIHPIP SVTVSQGNYV TEDIREGDQA 1261: EVIFSFEGTP PFSLTYVRTE ETDGKHGKRR SQVVETHKVT DIYSHEYKVI TSLQGTYEAI 1321: EITDAYCFAK NDLFFNN