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Accession Number: | P39705 |
Protein Name: | Nucleoporin NUP60 |
Length: | 539 |
Molecular Weight: | 59039.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Nucleoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-5821N DIP-5821N DIP-5821N DIP-5821N |
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RefSeq: | NP_009401.1 |
Entrez Gene ID: | 851263 |
KEGG: | sce:YAR002W sce:YAR002W sce:YAR002W sce:YAR002W |
Gene Ontology
GO:0031965
C:nuclear membrane
GO:0005643
C:nuclear pore
GO:0005515
F:protein binding
GO:0017056
F:structural constituent of nuclear pore
GO:0051028
P:mRNA transport
GO:0000059
P:protein import into nucleus, docking
GO:0055085
P:transmembrane transport
GO:0005543
F:phospholipid binding
GO:0006302
P:double-strand break repair
GO:0008298
P:intracellular mRNA localization
GO:0031990
P:mRNA export from nucleus in response to heat stress
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0016973
P:poly(A)+ mRNA export from nucleus
GO:0000973
P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0006611
P:protein export from nucleus
GO:0060188
P:regulation of protein desumoylation
GO:0034398
P:telomere tethering at nuclear periphery
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References (64)[1] “Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CENI-CDC15 region.” Clark M.W.et.al. 7941740 [2] “The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.” Bussey H.et.al. 7731988 [3] “Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.” Hu Y.et.al. 17322287 [4] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [5] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [6] “The nucleoporin Nup60p functions as a Gsp1p-GTP-sensitive tether for Nup2p at the nuclear pore complex.” Denning D.P.et.al. 11535617 [7] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [8] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [9] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [10] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [11] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [12] “Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.” Gruhler A.et.al. 15665377 [13] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [14] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [15] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [16] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [17] “Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CENI-CDC15 region.” Clark M.W.et.al. 7941740 [18] “The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.” Bussey H.et.al. 7731988 [19] “Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.” Hu Y.et.al. 17322287 [20] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [21] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [22] “The nucleoporin Nup60p functions as a Gsp1p-GTP-sensitive tether for Nup2p at the nuclear pore complex.” Denning D.P.et.al. 11535617 [23] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [24] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [25] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [26] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [27] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [28] “Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.” Gruhler A.et.al. 15665377 [29] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [30] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [31] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [32] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [33] “Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CENI-CDC15 region.” Clark M.W.et.al. 7941740 [34] “The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.” Bussey H.et.al. 7731988 [35] “Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.” Hu Y.et.al. 17322287 [36] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [37] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [38] “The nucleoporin Nup60p functions as a Gsp1p-GTP-sensitive tether for Nup2p at the nuclear pore complex.” Denning D.P.et.al. 11535617 [39] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [40] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [41] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [42] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [43] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [44] “Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.” Gruhler A.et.al. 15665377 [45] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [46] “Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.” Chi A.et.al. 17287358 [47] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [48] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [49] “Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CENI-CDC15 region.” Clark M.W.et.al. 7941740 [50] “The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.” Bussey H.et.al. 7731988 [51] “Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.” Hu Y.et.al. 17322287 [52] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [53] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [54] “The nucleoporin Nup60p functions as a Gsp1p-GTP-sensitive tether for Nup2p at the nuclear pore complex.” Denning D.P.et.al. 11535617 [55] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [56] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [57] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [58] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [59] “Targets of the cyclin-dependent kinase Cdk1.” Ubersax J.A.et.al. 14574415 [60] “Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.” Gruhler A.et.al. 15665377 |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MHRKSLRRAS ATVPSAPYRK QIISNAHNKP SLFSKIKTFF TQKDSARVSP RNNVANKQPR 61: NESFNRRISS MPGGYFHSEI SPDSTVNRSV VVSAVGEARN DIENKEEEYD ETHETNISNA 121: KLANFFSKKG NEPLSEIEIE GVMSLLQKSS KSMITSEGEQ KSAEGNNIDQ SLILKESGST 181: PISISNAPTF NPKYDTSNAS MNTTLGSIGS RKYSFNYSSL PSPYKTTVYR YSAAKKIPDT 241: YTANTSAQSI ASAKSVRSGV SKSAPSKKIS NTAAALVSLL DENDSKKNNA ASELANPYSS 301: YVSQIRKHKR VSPNAAPRQE ISEEETTVKP LFQNVPEQGE EPMKQLNATK ISPSAPSKDS 361: FTKYKPARSS SLRSNVVVAE TSPEKKDGGD KPPSSAFNFS FNTSRNVEPT ENAYKSENAP 421: SASSKEFNFT NLQAKPLVGK PKTELTKGDS TPVQPDLSVT PQKSSSKGFV FNSVQKKSRS 481: NLSQENDNEG KHISASIDND FSEEKAEEFD FNVPVVSKQL GNGLVDENKV EAFKSLYTF