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Accession Number: | P52593 |
Protein Name: | Nucleoporin NUP188 |
Length: | 1655 |
Molecular Weight: | 188577.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-2429N DIP-2429N DIP-2429N DIP-2429N |
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RefSeq: | NP_013604.1 |
Entrez Gene ID: | 854868 |
Pfam: | PF10487 |
KEGG: | sce:YML103C sce:YML103C sce:YML103C sce:YML103C |
Gene Ontology
GO:0031965
C:nuclear membrane
GO:0005643
C:nuclear pore
GO:0005515
F:protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0031990
P:mRNA export from nucleus in response to heat stress
GO:0006609
P:mRNA-binding (hnRNP) protein import into nucleus
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References (32)[1] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [2] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [3] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [4] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [5] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [6] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [7] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [8] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [9] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [10] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [11] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [12] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [13] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [14] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [15] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [16] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [17] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [18] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [19] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [20] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 [21] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [22] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [23] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [24] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [25] “Nic96p is required for nuclear pore formation and functionally interacts with a novel nucleoporin, Nup188p.” Zabel U.et.al. 8682854 [26] “The yeast nucleoporin Nup188p interacts genetically and physically with the core structures of the nuclear pore complex.” Nehrbass U.et.al. 8682855 [27] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [28] “Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.” Aitchison J.D.et.al. 8522578 |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MATPSFGNSS PQLTFTHVAN FMNDAAADVS AVDAKQLAQI RQFLKANKTN LIESLNTIRQ 61: NVTSSGDHNK LRSTIANLLQ INVDNDPFFA QSEDLSHAVE FFMSERSSRL HIVYSLLVNP 121: DIDLETYSFI DNDRFNVVGK LISIISSVIQ NYDIITASSL AHDYNNDQDM FTIVSLVQLK 181: KFSDLKFILQ ILQILNLMIL NTKVPVDIVN QWFLQYQNQF VEFCRNINST DKSIDTSSLQ 241: LYKFQNFQDL SYLSETLISR ISSLFTITTI LILGLNTSIA QFDIQSPLYM DTETFDTVNS 301: ALENDVATNI VNEDPIFHPM IHYSWSFILY YRRALQSSES FDDSDITKFA LFAESHDVLQ 361: KLNTLSEILS FDPVYTTVIT VFLEFSLNFI PITASTSRVF AKIISKAPEQ FIENFLTNDT 421: FEKKLSIIKA KLPLLNESLI PLINLALIDT EFANFELKDI CSFAVTKSSL NDLDYDLIAD 481: TITNSSSSSD IIVPDLIELK SDLLVAPPLE NENSNCLLSI PKSTKGKILT IKQQQQQQQQ 541: QNGQQPPTTS NLIIFLYKFN GWSLVGRILQ NLLHSYMEKG TQLDDLQHEL MISIIKLVTN 601: VVDPKTSIEK SSEILSYLSN SLDTSASTIN GASIIQVIFE IFEISLQRKD YTSIVQCCEF 661: MTMLTPNYLH LVSSYLNKSD LLDKYGKTGL SNMILGSVEL STGDYTFTIQ LLKLTKVFIR 721: ESLSLKNIHI SKRSKIDIIN KLILHAIHIF ESYYNWKYNN FLQKFEIAFH LTLIFYDVLH 781: DVFTINPHQK DQLIISSSAN KLLQLFLTPM DSIDLAPNTL TNILISPLNT TTKILGDKIL 841: GNLYSKVMNN SFKLCTLLIA IRGSNRDLKP SNLEKLLFIN SSKLVDVYTL PSYVHFKVQI 901: IELLSYLVEA PWNDDYPFLL SFLGEAKSMA FLKEVLSDLS SPVQDWNLLR SLYIFFTTLL 961: ESKQDGLSIL FLTGQFASNK KINDESSIDK KSSILTVLQK NSLLLDSTPE EVSCKLLETI 1021: TYVLNTWTNS KIFIKDPKFV NSLLAKLKDS KKLFQKKENL TRDETVSLIK KYKLISRIVE 1081: IFALCIYNST DSNSEILNFL NQEDLFELVH HFFQIDGFNK TFHDELNLKF KEKWPSLELQ 1141: SFQKIPLSRI NENENFGYDI PLLDIVLKAD RSWNEPSKSQ TNFKEEITDA SLNLQYVNYE 1201: ISTAKAWGAL ITTFVKRSTV PLNDGFVDLV EHFLKLNIDF GSDKQMFTQI YLERIELSFY 1261: ILYSFKLSGK LLKEEKIIEL MNKIFTIFKS GEIDFIKNIG KSLKNNFYRP LLRSVLVLLE 1321: LVSSGDRFIE LISDQLLEFF ELVFSKGVYL ILSEILCQIN KCSTRGLSTD HTTQIVNLED 1381: NTQDLLLLLS LFKKITNVNP SKNFNVILAS SLNEVGTLKV ILNLYSSAHL IRINDEPILG 1441: QITLTFISEL CSIEPIAAKL INSGLYSVLL ESPLSVAIQQ GDIKPEFSPR LHNIWSNGLL 1501: SIVLLLLSQF GIKVLPETCL FVSYFGKQIK STIYNWGDNK LAVSSSLIKE TNQLVLLQKM 1561: LNLLNYQELF IQPKNSDDQQ EAVELVIGLD SEHDKKRLSA ALSKFLTHPK YLNSRIIPTT 1621: LEEQQQLEDE SSRLEFVKGI SRDIKALQDS LFKDV