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Accession Number: | P52891 |
Protein Name: | Nucleoporin NUP84 |
Length: | 726 |
Molecular Weight: | 83635.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-2430N DIP-2430N DIP-2430N DIP-2430N |
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RefSeq: | NP_010167.1 |
Entrez Gene ID: | 851441 |
Pfam: | PF04121 |
KEGG: | sce:YDL116W sce:YDL116W sce:YDL116W sce:YDL116W |
Gene Ontology
GO:0031965
C:nuclear membrane
GO:0031080
C:Nup107-160 complex
GO:0005515
F:protein binding
GO:0005198
F:structural molecule activity
GO:0050000
P:chromosome localization
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006998
P:nuclear envelope organization
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006974
P:response to DNA damage stimulus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0031990
P:mRNA export from nucleus in response to heat stress
GO:0006609
P:mRNA-binding (hnRNP) protein import into nucleus
GO:0000973
P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
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References (28)[1] “A novel complex of nucleoporins, which includes Sec13p and a Sec13p homolog, is essential for normal nuclear pores.” Siniossoglou S.et.al. 8565072 [2] “The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.” Jacq C.et.al. 9169867 [3] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [4] “Modular self-assembly of a Y-shaped multiprotein complex from seven nucleoporins.” Lutzmann M.et.al. 11823431 [5] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [6] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [7] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [8] “A novel complex of nucleoporins, which includes Sec13p and a Sec13p homolog, is essential for normal nuclear pores.” Siniossoglou S.et.al. 8565072 [9] “The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.” Jacq C.et.al. 9169867 [10] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [11] “Modular self-assembly of a Y-shaped multiprotein complex from seven nucleoporins.” Lutzmann M.et.al. 11823431 [12] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [13] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [14] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [15] “A novel complex of nucleoporins, which includes Sec13p and a Sec13p homolog, is essential for normal nuclear pores.” Siniossoglou S.et.al. 8565072 [16] “The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.” Jacq C.et.al. 9169867 [17] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [18] “Modular self-assembly of a Y-shaped multiprotein complex from seven nucleoporins.” Lutzmann M.et.al. 11823431 [19] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [20] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [21] “Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.” Smolka M.B.et.al. 17563356 [22] “A novel complex of nucleoporins, which includes Sec13p and a Sec13p homolog, is essential for normal nuclear pores.” Siniossoglou S.et.al. 8565072 [23] “The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.” Jacq C.et.al. 9169867 [24] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MELSPTYQTE RFTKFSDTLK EFKIEQNNEQ NPIDPFNIIR EFRSAAGQLA LDLANSGDES 61: NVISSKDWEL EARFWHLVEL LLVFRNADLD LDEMELHPYN SRGLFEKKLM QDNKQLYQIW 121: IVMVWLKENT YVMERPKNVP TSKWLNSITS GGLKSCDLDF PLRENTNVLD VKDKEEDHIF 181: FKYIYELILA GAIDEALEEA KLSDNISICM ILCGIQEYLN PVIDTQIANE FNTQQGIKKH 241: SLWRRTVYSL SQQAGLDPYE RAIYSYLSGA IPNQEVLQYS DWESDLHIHL NQILQTEIEN 301: YLLENNQVGT DELILPLPSH ALTVQEVLNR VASRHPSESE HPIRVLMASV ILDSLPSVIH 361: SSVEMLLDVV KGTEASNDII DKPYLLRIVT HLAICLDIIN PGSVEEVDKS KLITTYISLL 421: KLQGLYENIP IYATFLNESD CLEACSFILS SLEDPQVRKK QIETINFLRL PASNILRRTT 481: QRVFDETEQE YSPSNEISIS FDVNNIDMHL IYGVEWLIEG KLYVDAVHSI IALSRRFLLN 541: GRVKALEQFM ERNNIGEICK NYELEKIADN ISKDENEDQF LEEITQYEHL IKGIREYEEW 601: QKSVSLLSSE SNIPTLIEKL QGFSKDTFEL IKTFLVDLTS SNFADSADYE ILYEIRALYT 661: PFLLMELHKK LVEAAKLLKI PKFISEALAF TSLVANENDK IYLLFQSSGK LKEYLDLVAR 721: TATLSN