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Accession Number: | Q02199 |
Protein Name: | Nucleoporin NUP49/NSP49 |
Length: | 472 |
Molecular Weight: | 49142.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-709N DIP-709N DIP-709N DIP-709N |
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RefSeq: | NP_011343.1 |
Entrez Gene ID: | 852703 |
KEGG: | sce:YGL172W sce:YGL172W sce:YGL172W sce:YGL172W |
Gene Ontology
GO:0055125
C:Nic96 complex
GO:0031965
C:nuclear membrane
GO:0042802
F:identical protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0000055
P:ribosomal large subunit export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0006388
P:tRNA splicing, via endonucleolytic cleavage...
GO:0016973
P:poly(A)+ mRNA export from nucleus
GO:0006606
P:protein import into nucleus
GO:0005515
F:protein binding
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References (60)[1] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [2] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [3] “The sequence of an 11.1 kb fragment on the left arm of Saccharomyces cerevisiae chromosome VII reveals six open reading frames including NSP49, KEM1 and four putative new genes.” Bertani I.et.al. 8619317 [4] “The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.” Tettelin H.et.al. 9169869 [5] “A novel nuclear pore protein Nup133p with distinct roles in poly(A)+ RNA transport and nuclear pore distribution.” Doye V.et.al. 7813444 [6] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [7] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [8] “A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.” Hurt E.C.et.al. 9971735 [9] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [10] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [11] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [12] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [13] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [14] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [15] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [16] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [17] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [18] “The sequence of an 11.1 kb fragment on the left arm of Saccharomyces cerevisiae chromosome VII reveals six open reading frames including NSP49, KEM1 and four putative new genes.” Bertani I.et.al. 8619317 [19] “The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.” Tettelin H.et.al. 9169869 [20] “A novel nuclear pore protein Nup133p with distinct roles in poly(A)+ RNA transport and nuclear pore distribution.” Doye V.et.al. 7813444 [21] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [22] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [23] “A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.” Hurt E.C.et.al. 9971735 [24] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [25] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [26] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [27] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [28] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [29] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [30] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [31] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [32] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [33] “The sequence of an 11.1 kb fragment on the left arm of Saccharomyces cerevisiae chromosome VII reveals six open reading frames including NSP49, KEM1 and four putative new genes.” Bertani I.et.al. 8619317 [34] “The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.” Tettelin H.et.al. 9169869 [35] “A novel nuclear pore protein Nup133p with distinct roles in poly(A)+ RNA transport and nuclear pore distribution.” Doye V.et.al. 7813444 [36] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [37] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [38] “A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.” Hurt E.C.et.al. 9971735 [39] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [40] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [41] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [42] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [43] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [44] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [45] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [46] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [47] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [48] “The sequence of an 11.1 kb fragment on the left arm of Saccharomyces cerevisiae chromosome VII reveals six open reading frames including NSP49, KEM1 and four putative new genes.” Bertani I.et.al. 8619317 [49] “The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.” Tettelin H.et.al. 9169869 [50] “A novel nuclear pore protein Nup133p with distinct roles in poly(A)+ RNA transport and nuclear pore distribution.” Doye V.et.al. 7813444 [51] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [52] “In vitro reconstitution of a heterotrimeric nucleoporin complex consisting of recombinant Nsp1p, Nup49p, and Nup57p.” Schlaich N.L.et.al. 9017593 [53] “A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.” Hurt E.C.et.al. 9971735 [54] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [55] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [56] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MFGLNKASST PAGGLFGQAS GASTGNANTG FSFGGTQTGQ NTGPSTGGLF GAKPAGSTGG 61: LGASFGQQQQ QSQTNAFGGS ATTGGGLFGN KPNNTANTGG GLFGANSNSN SGSLFGSNNA 121: QTSRGLFGNN NTNNINNSSS GMNNASAGLF GSKPAGGTSL FGNTSTSSAP AQNQGMFGAK 181: PAGTSLFGNN AGNTTTGGGL FGSKPTGATS LFGSSNNNNN NNNSNNIMSA SGGLFGNQQQ 241: QLQQQPQMQC ALQNLSQLPI TPMTRISELP PQIRQEIEQL DQYIQKQVQI SHHLKADTID 301: HDELIDSIPR DVAYLLKSES ATSQYLKQDL KKISSFKSLI DEDLLDTQTF SVLLQQLLTP 361: GSKISSNDLD KFFQKKIHLY EKKLEDYCRI LSDIETAVNG IDTDLFGAPN NPNSTAITAD 421: LGSSEAENLL QLKTGLAAIV STVIEEFTLF MDIAERIAVL HQKTKTLASL SI