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Accession Number: | Q02629 |
Protein Name: | Nucleoporin NUP100/NSP100 |
Length: | 959 |
Molecular Weight: | 99988.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-2351N DIP-2351N DIP-2351N DIP-2351N |
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RefSeq: | NP_012855.1 |
Entrez Gene ID: | 853796 |
Pfam: | PF04096 |
KEGG: | sce:YKL068W sce:YKL068W sce:YKL068W sce:YKL068W |
Gene Ontology
GO:0031965
C:nuclear membrane
GO:0005643
C:nuclear pore
GO:0042802
F:identical protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0031990
P:mRNA export from nucleus in response to heat stress
GO:0000973
P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0015031
P:protein transport
GO:0005515
F:protein binding
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References (68)[1] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [2] “Sequence of a 20.7 kb region of yeast chromosome XI includes the NUP100 gene, an open reading frame (ORF) possibly representing a nucleoside diphosphate kinase gene, tRNAs for His, Val and Trp in addition to seven ORFs with weak or no significant similarity to known proteins.” Rasmussen S.W.et.al. 8091863 [3] “Complete DNA sequence of yeast chromosome XI.” Dujon B.et.al. 8196765 [4] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [5] “The GLFG repetitive region of the nucleoporin Nup116p interacts with Kap95p, an essential yeast nuclear import factor.” Iovine M.K.et.al. 8557738 [6] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [7] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [8] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [9] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [10] “Deciphering networks of protein interactions at the nuclear pore complex.” Allen N.P.et.al. 12543930 [11] “A gradient of affinity for the karyopherin Kap95p along the yeast nuclear pore complex.” Pyhtila B.et.al. 12917401 [12] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [13] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [14] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [15] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [16] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [17] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [18] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [19] “Sequence of a 20.7 kb region of yeast chromosome XI includes the NUP100 gene, an open reading frame (ORF) possibly representing a nucleoside diphosphate kinase gene, tRNAs for His, Val and Trp in addition to seven ORFs with weak or no significant similarity to known proteins.” Rasmussen S.W.et.al. 8091863 [20] “Complete DNA sequence of yeast chromosome XI.” Dujon B.et.al. 8196765 [21] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [22] “The GLFG repetitive region of the nucleoporin Nup116p interacts with Kap95p, an essential yeast nuclear import factor.” Iovine M.K.et.al. 8557738 [23] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [24] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [25] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [26] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [27] “Deciphering networks of protein interactions at the nuclear pore complex.” Allen N.P.et.al. 12543930 [28] “A gradient of affinity for the karyopherin Kap95p along the yeast nuclear pore complex.” Pyhtila B.et.al. 12917401 [29] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [30] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [31] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [32] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [33] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [34] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [35] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [36] “Sequence of a 20.7 kb region of yeast chromosome XI includes the NUP100 gene, an open reading frame (ORF) possibly representing a nucleoside diphosphate kinase gene, tRNAs for His, Val and Trp in addition to seven ORFs with weak or no significant similarity to known proteins.” Rasmussen S.W.et.al. 8091863 [37] “Complete DNA sequence of yeast chromosome XI.” Dujon B.et.al. 8196765 [38] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [39] “The GLFG repetitive region of the nucleoporin Nup116p interacts with Kap95p, an essential yeast nuclear import factor.” Iovine M.K.et.al. 8557738 [40] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [41] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [42] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [43] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [44] “Deciphering networks of protein interactions at the nuclear pore complex.” Allen N.P.et.al. 12543930 [45] “A gradient of affinity for the karyopherin Kap95p along the yeast nuclear pore complex.” Pyhtila B.et.al. 12917401 [46] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [47] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [48] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [49] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [50] “Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.” Li X.et.al. 17330950 [51] “A multidimensional chromatography technology for in-depth phosphoproteome analysis.” Albuquerque C.P.et.al. 18407956 [52] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [53] “Sequence of a 20.7 kb region of yeast chromosome XI includes the NUP100 gene, an open reading frame (ORF) possibly representing a nucleoside diphosphate kinase gene, tRNAs for His, Val and Trp in addition to seven ORFs with weak or no significant similarity to known proteins.” Rasmussen S.W.et.al. 8091863 [54] “Complete DNA sequence of yeast chromosome XI.” Dujon B.et.al. 8196765 [55] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [56] “The GLFG repetitive region of the nucleoporin Nup116p interacts with Kap95p, an essential yeast nuclear import factor.” Iovine M.K.et.al. 8557738 [57] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [58] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [59] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [60] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [61] “Deciphering networks of protein interactions at the nuclear pore complex.” Allen N.P.et.al. 12543930 [62] “A gradient of affinity for the karyopherin Kap95p along the yeast nuclear pore complex.” Pyhtila B.et.al. 12917401 [63] “Global analysis of protein expression in yeast.” Ghaemmaghami S.et.al. 14562106 [64] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MFGNNRPMFG GSNLSFGSNT SSFGGQQSQQ PNSLFGNSNN NNNSTSNNAQ SGFGGFTSAA 61: GSNSNSLFGN NNTQNNGAFG QSMGATQNSP FGSLNSSNAS NGNTFGGSSS MGSFGGNTNN 121: AFNNNSNSTN SPFGFNKPNT GGTLFGSQNN NSAGTSSLFG GQSTSTTGTF GNTGSSFGTG 181: LNGNGSNIFG AGNNSQSNTT GSLFGNQQSS AFGTNNQQGS LFGQQSQNTN NAFGNQNQLG 241: GSSFGSKPVG SGSLFGQSNN TLGNTTNNRN GLFGQMNSSN QGSSNSGLFG QNSMNSSTQG 301: VFGQNNNQMQ INGNNNNSLF GKANTFSNSA SGGLFGQNNQ QQGSGLFGQN SQTSGSSGLF 361: GQNNQKQPNT FTQSNTGIGL FGQNNNQQQQ STGLFGAKPA GTTGSLFGGN SSTQPNSLFG 421: TTNVPTSNTQ SQQGNSLFGA TKLTNMPFGG NPTANQSGSG NSLFGTKPAS TTGSLFGNNT 481: ASTTVPSTNG LFGNNANNST STTNTGLFGA KPDSQSKPAL GGGLFGNSNS NSSTIGQNKP 541: VFGGTTQNTG LFGATGTNSS AVGSTGKLFG QNNNTLNVGT QNVPPVNNTT QNALLGTTAV 601: PSLQQAPVTN EQLFSKISIP NSITNPVKAT TSKVNADMKR NSSLTSAYRL APKPLFAPSS 661: NGDAKFQKWG KTLERSDRGS STSNSITDPE SSYLNSNDLL FDPDRRYLKH LVIKNNKNLN 721: VINHNDDEAS KVKLVTFTTE SASKDDQASS SIAASKLTEK AHSPQTDLKD DHDESTPDPQ 781: SKSPNGSTSI PMIENEKISS KVPGLLSNDV TFFKNNYYIS PSIETLGNKS LIELRKINNL 841: VIGHRNYGKV EFLEPVDLLN TPLDTLCGDL VTFGPKSCSI YENCSIKPEK GEGINVRCRV 901: TLYSCFPIDK ETRKPIKNIT HPLLKRSIAK LKENPVYKFE SYDPVTGTYS YTIDHPVLT