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Accession Number: | Q02630 |
Protein Name: | Nucleoporin NUP116/NSP116 |
Length: | 1113 |
Molecular Weight: | 116234.00 |
Species: | Saccharomyces cerevisiae (Baker's yeast) [4932] |
Location1 / Topology2 / Orientation3: | Nucleus1 / Peripheral membrane protein2 / Cytoplasmic side3 |
Substrate |
Cross database links:
DIP: | DIP-2389N DIP-2389N DIP-2389N DIP-2389N |
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RefSeq: | NP_013762.1 |
Entrez Gene ID: | 855066 |
Pfam: | PF04096 |
KEGG: | sce:YMR047C sce:YMR047C sce:YMR047C sce:YMR047C |
Gene Ontology
GO:0031965
C:nuclear membrane
GO:0055126
C:Nup82 complex
GO:0042802
F:identical protein binding
GO:0005198
F:structural molecule activity
GO:0006406
P:mRNA export from nucleus
GO:0006609
P:mRNA-binding (hnRNP) protein import into nu...
GO:0006607
P:NLS-bearing substrate import into nucleus
GO:0006999
P:nuclear pore organization
GO:0006611
P:protein export from nucleus
GO:0006610
P:ribosomal protein import into nucleus
GO:0006407
P:rRNA export from nucleus
GO:0006408
P:snRNA export from nucleus
GO:0006608
P:snRNP protein import into nucleus
GO:0055085
P:transmembrane transport
GO:0006409
P:tRNA export from nucleus
GO:0006388
P:tRNA splicing, via endonucleolytic cleavage...
GO:0016973
P:poly(A)+ mRNA export from nucleus
GO:0006606
P:protein import into nucleus
GO:0000055
P:ribosomal large subunit export from nucleus
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References (79)[1] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [2] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [3] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [4] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [5] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [6] “Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.” Bailer S.M.et.al. 9463388 [7] “Interactions between a nuclear transporter and a subset of nuclear pore complex proteins depend on Ran GTPase.” Seedorf M.et.al. 9891088 [8] “Assembly and preferential localization of Nup116p on the cytoplasmic face of the nuclear pore complex by interaction with Nup82p.” Ho A.K.et.al. 10891509 [9] “Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export.” Straesser K.et.al. 10952996 [10] “Factors affecting nuclear export of the 60S ribosomal subunit in vivo.” Stage-Zimmermann T.et.al. 11071906 [11] “Nup116p associates with the Nup82p-Nsp1p-Nup159p nucleoporin complex.” Bailer S.M.et.al. 10801828 [12] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [13] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [14] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [15] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [16] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [17] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [18] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [19] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [20] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [21] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [22] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [23] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [24] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [25] “Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.” Bailer S.M.et.al. 9463388 [26] “Interactions between a nuclear transporter and a subset of nuclear pore complex proteins depend on Ran GTPase.” Seedorf M.et.al. 9891088 [27] “Assembly and preferential localization of Nup116p on the cytoplasmic face of the nuclear pore complex by interaction with Nup82p.” Ho A.K.et.al. 10891509 [28] “Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export.” Straesser K.et.al. 10952996 [29] “Factors affecting nuclear export of the 60S ribosomal subunit in vivo.” Stage-Zimmermann T.et.al. 11071906 [30] “Nup116p associates with the Nup82p-Nsp1p-Nup159p nucleoporin complex.” Bailer S.M.et.al. 10801828 [31] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [32] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [33] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [34] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [35] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [36] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [37] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [38] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [39] “Cex1p is a novel cytoplasmic component of the Saccharomyces cerevisiae nuclear tRNA export machinery.” McGuire A.T.et.al. 17203074 [40] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [41] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [42] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [43] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [44] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [45] “Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.” Bailer S.M.et.al. 9463388 [46] “Interactions between a nuclear transporter and a subset of nuclear pore complex proteins depend on Ran GTPase.” Seedorf M.et.al. 9891088 [47] “Assembly and preferential localization of Nup116p on the cytoplasmic face of the nuclear pore complex by interaction with Nup82p.” Ho A.K.et.al. 10891509 [48] “Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export.” Straesser K.et.al. 10952996 [49] “Factors affecting nuclear export of the 60S ribosomal subunit in vivo.” Stage-Zimmermann T.et.al. 11071906 [50] “Nup116p associates with the Nup82p-Nsp1p-Nup159p nucleoporin complex.” Bailer S.M.et.al. 10801828 [51] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [52] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [53] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [54] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [55] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 [56] “Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.” Denning D.P.et.al. 12604785 [57] “Minimal nuclear pore complexes define FG repeat domains essential for transport.” Strawn L.A.et.al. 15039779 [58] “Peering through the pore: nuclear pore complex structure, assembly, and function.” Suntharalingam M.et.al. 12791264 [59] “Cex1p is a novel cytoplasmic component of the Saccharomyces cerevisiae nuclear tRNA export machinery.” McGuire A.T.et.al. 17203074 [60] “A new family of yeast nuclear pore complex proteins.” Wente S.R.et.al. 1385442 [61] “A new subclass of nucleoporins that functionally interact with nuclear pore protein NSP1.” Wimmer C.et.al. 1464327 [62] “The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.” Bowman S.et.al. 9169872 [63] “Nup145p is required for nuclear export of mRNA and binds homopolymeric RNA in vitro via a novel conserved motif.” Fabre E.et.al. 8044840 [64] “Yeast nucleoporin mutants are defective in pre-tRNA splicing.” Sharma K.et.al. 8524308 [65] “Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.” Bailer S.M.et.al. 9463388 [66] “Interactions between a nuclear transporter and a subset of nuclear pore complex proteins depend on Ran GTPase.” Seedorf M.et.al. 9891088 [67] “Assembly and preferential localization of Nup116p on the cytoplasmic face of the nuclear pore complex by interaction with Nup82p.” Ho A.K.et.al. 10891509 [68] “Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export.” Straesser K.et.al. 10952996 [69] “Factors affecting nuclear export of the 60S ribosomal subunit in vivo.” Stage-Zimmermann T.et.al. 11071906 [70] “Nup116p associates with the Nup82p-Nsp1p-Nup159p nucleoporin complex.” Bailer S.M.et.al. 10801828 [71] “The yeast nuclear pore complex: composition, architecture, and transport mechanism.” Rout M.P.et.al. 10684247 [72] “Proteomic analysis of nucleoporin interacting proteins.” Allen N.P.et.al. 11387327 [73] “The Nsp1p carboxy-terminal domain is organized into functionally distinct coiled-coil regions required for assembly of nucleoporin subcomplexes and nucleocytoplasmic transport.” Bailer S.M.et.al. 11689687 [74] “The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.” Strawn L.A.et.al. 11104765 [75] “GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.” Bayliss R.et.al. 12372823 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MFGVSRGAFP SATTQPFGST GSTFGGQQQQ QQPVANTSAF GLSQQTNTTQ APAFGNFGNQ 61: TSNSPFGMSG STTANGTPFG QSQLTNNNAS GSIFGGMGNN TALSAGSASV VPNSTAGTSI 121: KPFTTFEEKD PTTGVINVFQ SITCMPEYRN FSFEELRFQD YQAGRKFGTS QNGTGTTFNN 181: PQGTTNTGFG IMGNNNSTTS ATTGGLFGQK PATGMFGTGT GSGGGFGSGA TNSTGLFGSS 241: TNLSGNSAFG ANKPATSGGL FGNTTNNPTN GTNNTGLFGQ QNSNTNGGLF GQQQNSFGAN 301: NVSNGGAFGQ VNRGAFPQQQ TQQGSGGIFG QSNANANGGA FGQQQGTGAL FGAKPASGGL 361: FGQSAGSKAF GMNTNPTGTT GGLFGQTNQQ QSGGGLFGQQ QNSNAGGLFG QNNQSQNQSG 421: LFGQQNSSNA FGQPQQQGGL FGSKPAGGLF GQQQGASTFA SGNAQNNSIF GQNNQQQQST 481: GGLFGQQNNQ SQSQPGGLFG QTNQNNNQPF GQNGLQQPQQ NNSLFGAKPT GFGNTSLFSN 541: STTNQSNGIS GNNLQQQSGG LFQNKQQPAS GGLFGSKPSN TVGGGLFGNN QVANQNNPAS 601: TSGGLFGSKP ATGSLFGGTN STAPNASSGG IFGSNNASNT AATTNSTGLF GNKPVGAGAS 661: TSAGGLFGNN NNSSLNNSNG STGLFGSNNT SQSTNAGGLF QNNTSTNTSG GGLFSQPSQS 721: MAQSQNALQQ QQQQQRLQIQ NNNPYGTNEL FSKATVTNTV SYPIQPSATK IKADERKKAS 781: LTNAYKMIPK TLFTAKLKTN NSVMDKAQIK VDPKLSISID KKNNQIAISN QQEENLDESI 841: LKASELLFNP DKRSFKNLIN NRKMLIASEE KNNGSQNNDM NFKSKSEEQE TILGKPKMDE 901: KETANGGERM VLSSKNDGED SATKHHSRNM DEENKENVAD LQKQEYSEDD KKAVFADVAE 961: KDASFINENY YISPSLDTLS SYSLLQLRKV PHLVVGHKSY GKIEFLEPVD LAGIPLTSLG 1021: GVIITFEPKT CIIYANLPNR PKRGEGINVR ARITCFNCYP VDKSTRKPIK DPNHQLVKRH 1081: IERLKKNPNS KFESYDADSG TYVFIVNHAA EQT