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1.A.4.2.11
TRPV6 epithelial Ca2+ channel (ECaC2) (forms homo- and heterotetrameric channels with TRPV5; requires the S100A10-annexin 2 complex for routing to the plasma membrane) (Hoenderop et al., 2003; van de Graaf et al., 2003). Epithelial TrpV6, but not TrpV5, is inhibited by the regulator of G-protein signaling 2 (RGS2; Q9JHX0; 211 aas) by direct binding (Schoeber et al., 2006). Calmodulin (CaM) positively affects TRPV6 activity upon Ca2+ binding to EF-hands 3 and 4, located in the high Ca2+ affinity CaM C-terminus (Lambers et al. 2004). Cyclophilin B is an accessory activating protein (Stumpf et al., 2008).  The crystal structure of rat TRPV6 at 3.25 A resolution revealed shared and unique features compared with other TRP channels (Saotome et al. 2016). Intracellular domains engage in extensive interactions to form an intracellular 'skirt' involved in allosteric modulation. In the K+ channel-like transmembrane domain, Ca2+ selectivity is determined by direct coordination of Ca2+ by a ring of aspartate side chains in the selectivity filter (Saotome et al. 2016).  Replacing Gly-516 within the cytosolic S4-S5 linker (conserved in all TRP channel proteins) by ser forces the channels into an open conformation, thereby enhancing constitutive Ca2+ entry and preventing inactivation (Hofmann et al. 2016). Tetrameric ion channels have either swapped or non-swapped arrangements of the S1-S4 and pore domains. Singh et al. 2017 showed that mutations in the transmembrane domain can result in conversion from a domain-swapped to the non-swapped fold. These results raise the possibility that a single ion channel subtype can fold into either arrangement in vivo, affecting its function in normal or disease states. Cryo-EM structures of human TRPV6 in the open and closed states shows that the channel selectivity filter adopts similar conformations in both states, consistent with its explicit role in ion permeation. The iris-like channel opening is accompanied by an alpha-to-pi-helical transition in the pore-lining transmembrane helix S6 at an alanine hinge just below the selectivity filter. As a result of this transition, the S6 helices bend and rotate, exposing different residues to the ion channel pore in the open and closed states (McGoldrick et al. 2017). TRPV6 is an epithelial Ca2+-selective channel associated with transient neonatal hyperparathyroidism (TNHP), an autosomal-recessive disease caused by TRPV6 mutations that affect maternal-fetal calcium transport (Suzuki et al. 2018). TRPV6 mediates calcium uptake in epithelia, and its expression increases in numerous types of cancer while inhibitors suppress tumor growth. Singh et al. 2018 presented crystal and cryo-EM structures of human and rat TRPV6 bound to 2-aminoethoxydiphenyl borate (2-APB), a TRPV6 inhibitor and modulator of numerous TRP channels. 2-APB binds to TRPV6 in a pocket formed by the cytoplasmic half of the S1-S4 transmembrane helix bundle. 2-APB induces TRPV6 channel closure by modulating protein-lipid interactions. The 2-APB binding site may be present in other members of vanilloid subfamily TRP channels. The crystal structure has been determined (see 30299652 and Yelshanskaya et al. 2020). Novel mutations in TRPV6 give rise to the spectrum of transient neonatal hyperparathyroidism (Suzuki et al. 2020). TRPV6) plays roles in calcium absorption in epithelia and bone and is involved in human diseases including vitamin-D deficiency, osteoporosis, and cancer. Cai et al. 2020 showed that the TRPV6 intramolecular S4-S5 linker to the C-terminal TRP helix (L/C) and N-terminal pre-S1 helix to TRP helix (N/C) interactions, mediated by Arg470:Trp593 and Trp321:Ile597 bonding, respectively, are autoinhibitory and are required for maintaining TRPV6 at basal states. Disruption of either interaction by mutations or blocking peptides activates TRPV6. The N/C interaction depends on the L/C interaction but not inversely. Three cationic residues in S5 or the C terminus are involved in binding PIP2 to suppress both interactions, thereby activating TRPV6 (Cai et al. 2020). The biochemistry and pathophysiology of the Transient Potential Receptor Vanilloid 6 (TRPV6) calcium channelhave been reviewed (Walker and Vuister 2023).

Accession Number:Q9H1D0
Protein Name:TRPV6
Length:725
Molecular Weight:83210.00
Species:Homo sapiens (Human) [9606]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate inorganic cation, calcium(2+)

Cross database links:

RefSeq: NP_061116.2   
Entrez Gene ID: 55503   
Pfam: PF00023    PF00520   
OMIM: 606680  gene
KEGG: hsa:55503   

Gene Ontology

GO:0005887 C:integral to plasma membrane
GO:0005262 F:calcium channel activity
GO:0005516 F:calmodulin binding
GO:0006816 P:calcium ion transport
GO:0017158 P:regulation of calcium ion-dependent exocytosis
GO:0055085 P:transmembrane transport

References (8)

[1] “Human calcium transport protein CaT1.”  Peng J.-B.et.al.   11097838
[2] “1,25-dihydroxyvitamin D3 increases the expression of the CaT1 epithelial calcium channel in the Caco-2 human intestinal cell line.”  Wood R.J.et.al.   11545681
[3] “Structural conservation of the genes encoding CaT1, CaT2, and related cation channels.”  Peng J.-B.et.al.   11549322
[4] “Expression of CaT-like, a novel calcium selective channel, correlates with the malignancy of prostate cancer.”  Wissenbach U.et.al.   11278579
[5] “Complete sequencing and characterization of 21,243 full-length human cDNAs.”  Ota T.et.al.   14702039
[6] “Human chromosome 7: DNA sequence and biology.”  Scherer S.W.et.al.   12690205
[7] “Competitive regulation of CaT-like-mediated Ca2+ entry by protein kinase C and calmodulin.”  Niemeyer B.A.et.al.   11248124
[8] “Ca2+ dependence of the Ca2+-selective TRPV6 channel.”  Bodding M.et.al.   15184369
Structure:
6BO8   6BO9   6BOA   6D7S   6D7T   6E2F     

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MGLSLPKEKG LILCLWSKFC RWFQRRESWA QSRDEQNLLQ QKRIWESPLL LAAKDNDVQA 
61:	LNKLLKYEDC KVHQRGAMGE TALHIAALYD NLEAAMVLME AAPELVFEPM TSELYEGQTA 
121:	LHIAVVNQNM NLVRALLARR ASVSARATGT AFRRSPCNLI YFGEHPLSFA ACVNSEEIVR 
181:	LLIEHGADIR AQDSLGNTVL HILILQPNKT FACQMYNLLL SYDRHGDHLQ PLDLVPNHQG 
241:	LTPFKLAGVE GNTVMFQHLM QKRKHTQWTY GPLTSTLYDL TEIDSSGDEQ SLLELIITTK 
301:	KREARQILDQ TPVKELVSLK WKRYGRPYFC MLGAIYLLYI ICFTMCCIYR PLKPRTNNRT 
361:	SPRDNTLLQQ KLLQEAYMTP KDDIRLVGEL VTVIGAIIIL LVEVPDIFRM GVTRFFGQTI 
421:	LGGPFHVLII TYAFMVLVTM VMRLISASGE VVPMSFALVL GWCNVMYFAR GFQMLGPFTI 
481:	MIQKMIFGDL MRFCWLMAVV ILGFASAFYI IFQTEDPEEL GHFYDYPMAL FSTFELFLTI 
541:	IDGPANYNVD LPFMYSITYA AFAIIATLLM LNLLIAMMGD THWRVAHERD ELWRAQIVAT 
601:	TVMLERKLPR CLWPRSGICG REYGLGDRWF LRVEDRQDLN RQRIQRYAQA FHTRGSEDLD 
661:	KDSVEKLELG CPFSPHLSLP MPSVSRSTSR SSANWERLRQ GTLRRDLRGI INRGLEDGES 
721:	WEYQI