TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
8.B.25.1.1









Viral protein inhibitor of the TAP ABC transporter (TC# 3.A.1.209.1) of 98 aas and 2 TMSs (Verweij et al. 2008).

Viruses
Heunggongvirae, Peploviricota
Glycoprotein N of Suid herpesvirus 1 (SuHV-1) (Pseudorabies virus)
8.B.25.1.2









GN polyprotein protein product, UL49.5, of 96 aas and 2 TMSs, N- and C-terminal. It is an inhibitor of the transporter associated with antigen processing (TAP) system (TC# 3.A.1.209.1), and it's 3-D structure has been determined (Karska et al. 2019).  UL49.5 contains an extracellular region (residues 1-35) and a transmembrane-intracellular segment (residues 36-75), with a flexible membrane-proximal helical structure in the extracellular part, two short alpha-helices in the transmembrane region, and an unordered structure for the cytoplasmic part. Karska et al. 2019 propose three different orientations of UL49.5 when in complex with TAP.  Bovine herpesvirus type 1 (BoHV-1) is a pathogen of cattle responsible for infectious bovine rhinotracheitis. The BoHV-1 UL49.5 binds to the transporter associated with antigen processing (TAP) and downregulates cell surface expression of the antigenic peptide complexes with the major histocompatibility complex class I (MHC-I). KLHDC3 is a kelch domain-containing protein 3 and a substrate receptor of a cullin2-RING (CRL2) E3 ubiquitin ligase. CRL2KLHDC3 is responsible for UL49.5-triggered TAP degradation via a C-degron pathway, but the presence of the degron sequence does not lead to the degradation of UL49.5 itself. The network of polar interactions may be responsible for recognition and binding of the degron in KLHDC3. The interaction network within the binding pocket appears to be similar between two CRL2 substrate receptors: KLHDC3 and KLHDC2 (Ślusarz and Lipińska 2024).

Viruses
Heunggongvirae, Peploviricota
GN of Bovine herpes virus
8.B.25.1.3









GN1 of 95 aas and 2 TM

Viruses
Heunggongvirae, Peploviricota
GN1 of Feline herpesvirus 1 (FeHV-1) (Feline viral rhinotracheitis virus)
8.B.25.1.4









GN1 or UL49.5 of 87 aas and 2 TMSs.  May be N-terminally truncated.

Viruses
Heunggongvirae, Peploviricota
GN1 of Human herpesvirus 3 (HHV-3) (Varicella-zoster virus)
8.B.25.1.5









UL49.5 of 95 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
UL49.5 of Gallid herpesvirus 3
8.B.25.1.6









Human herpes virus GN1 of 91 aas and 2 TMSs, N- and C-terminal. The proline hinge sequence with its highly rigid conformation serves as an anchor into the membrane. This anchor is responsible for the structural and dynamical behavior of the whole protein, constraining the mobility of the C-terminus, increasing the mobility of the transmembrane region, and controlling accessibility of the C-terminal residues to the cytoplasmic environment (Graul et al. 2023).

Viruses
Heunggongvirae, Peploviricota
GN1 of Human herpesvirus 1 (HHV-1) (Human herpes simplex virus 1)
8.B.25.1.7









UL49.5 of 97 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
UL49.5 of Leporid herpesvirus 4
8.B.25.1.8









Glycoprotein N of 78 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
GN of Cercopithecine herpesvirus 16 (CeHV-16) (Herpesvirus papio 2)
8.B.25.2.1









BLRF1 or GN of 102 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
BLRF1 of Epstein-Barr virus (HHV-4) (Human herpesvirus 4)
8.B.25.2.2









Envelope glycoprotein N, UL73, of 104 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
UL73 of Simian cytomegalovirus
8.B.25.2.3









gpUL73 of 134 aas and 2 TMSs

Viruses
Heunggongvirae, Peploviricota
gpUL73 of Human cytomegalovirus (HHV-5) (Human herpesvirus 5)