TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
9.B.238.1.1 | Uncharacterized protein of 244 aas and 5 N-terminal TMSs. This protein resembles (e-8) the ABC membrane protein with TC# 2.A.1.103.7 and therefore may be an ABC membrane constituent. | Bacteria |
Candidatus Beckwithbacteria | UP of Candidatus Beckwithbacteria bacterium |
9.B.238.1.2 | Uncharacterized protein of 247 aas and 5 N-terminal TMSs. | Bacteria |
Candidatus Roizmanbacteria | UP of Candidatus Roizmanbacteria bacterium |
9.B.238.1.3 | Uncharacterized protein of 218 aas and 5 TMSs. | Bacteria |
Candidatus Microgenomates | UP of Microgenomates bacterium |
9.B.238.2.1 | Histidine kinase of 399 aas and 5 TMSs. | Bacteria |
Bacteroidota | HK of Kordia sp. |
9.B.238.2.2 | Sensor histidine kinase of 402 aas and 5 N-terminal TMSs. | Bacteria |
Bacteroidota | HK of Pricia antarctica |
9.B.238.3.1 | Hybrid sensor histidine kinase/response regulator of 568 aas and 6 TMSs. | Bacteria |
Balneolota | HK of Balneola vulgaris |
9.B.238.3.2 | HAMP domain sensor kinase of 511 aas, with an N-terminal transmembrane domain with 6 TMSs. | Bacteria |
Pseudomonadota | SK of Shinella sp. HZN7 |
9.B.238.3.3 | HAMP domain-containing histidine kinase of 768 aas and 5 TMSs in a 1 (N-terminal) + 4 (central) TMS arrangement. | Bacteria |
Bacillota | Sensor Kinase of Anaerocolumna sp. |
9.B.238.3.4 | Uncharacterized protein of 435 aas and 7 N-terminal TMSs. | Bacteria |
Pseudomonadota | UP of Enhydrobacter sp. |
9.B.238.3.5 | Integral membrane histidine sensor kinase, DesK or YocF, with 370 aas and 5 or 6 N-terminal TMSs plus a C-terminal kinase domain. It aligns with residues 20 - 420 of the histidine kinase with TC# 9.B.238.3.1. It is a member of the two-component regulatory system DesR/DesK (Albanesi et al. 2004), responsible for cold induction of the des gene coding for the Delta5 acyl-lipid desaturase (Aguilar et al. 2001). It acts as a sensor of membrane fluidity (Cybulski et al. 2002) and probably activates DesR by phosphorylation (Hunger et al. 2004). The transmembrane region triggers phosphorylation of the catalytic domain as soon as the membrane lipids rigidify. Interhelical H-bonds modulate its activity (Almada et al. 2021).
| Bacteria |
Bacillota | DesK of Bacillus subtilis |
9.B.238.3.6 | Drug sensory protein A, Dfr, Hik33, NblS, Syny4, a histidine kinase of 642 aas and 4 - 7 TMSs in a 2 + 2 or 3 + 3 + 1 TMS arrangement. It is a cell wall metabolism sensor histidine kinase, also called WalK. The transmembrane domains govern temperature responses, whereas the PAS domain may be involved in regulation of downstream gene expression in a light-dependent manner (Leusenko et al. 2023). | Bacteria |
Cyanobacteriota | Dfr of Synechocystis sp. PCC 6714 |
9.B.238.3.7 | Arabidopsis histidine kinase 4, AtHK4; Cytokinin receptor; CYTOKININ RESPONSE PROTWIN 1; AtCRE1; Cytokinin receptor CRE1; Phosphoprotein phosphatase AHK4 of 1080 aas with 2 TMSs at about residues 130 and 430. | Eukaryota |
Viridiplantae, Streptophyta | HK4 of Arabidopsis thaliana |