TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.C.47.2.1
L-Plectasin (40aas, 1 TMS); precursor (90aas, 2 TMSs). 3-d structure known (3E7R_L; 1ZFUA) (Mygind et al., 2005; Zhu, 2008) (43% identical to 1.C.47.1.1).

Accession Number:Q53I06
Protein Name:Plectasin
Length:95
Molecular Weight:10254.00
Species:pseudoplectania nigrella (Ebony cup) [96584]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules, ions

Cross database links:

Pfam: PF01097   

Gene Ontology

GO:0005576 C:extracellular region
GO:0042742 P:defense response to bacterium

References (1)

[1] “Plectasin is a peptide antibiotic with therapeutic potential from a saprophytic fungus.”  Mygind P.H.et.al.   16222292
Structure:
1ZFU   3E7R   3E7U     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MQFTTILSIG ITVFGLLNTG AFAAPQPVPE AYAVSDPEAH PDDFAGMDAN QLQKRGFGCN 
61:	GPWDEDDMQC HNHCKSIKGY KGGYCAKGGF VCKCY