TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.G.5.1.1
The Vesicular Stomatitis Virus (VSV) Glycoprotein G (423 aas)

Accession Number:P0C2X0
Protein Name:Glycoprotein G [Fragment]
Length:423
Molecular Weight:47396.00
Species:Vesicular stomatitis Indiana virus (strain Mudd-Summers) (VSIV) [11279]
Location1 / Topology2 / Orientation3: Virion membrane1 / Single-pass type I membrane protein2
Substrate small molecules

Cross database links:

Pfam: PF00974   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0019031 C:viral envelope
GO:0055036 C:virion membrane

References (1)

[1] “Crystal structure of the low-pH form of the vesicular stomatitis virus glycoprotein G.”  Roche S.et.al.   16840692
Structure:
2CMZ   2J6J     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	KFTIVFPHNQ KGNWKNVPSN YHYCPSSSDL NWHNDLIGTA IQVKMPKSHK AIQADGWMCH 
61:	ASKWVTTCDF RWYGPKYITQ SIRSFTPSVE QCKESIEQTK QGTWLNPGFP PQSCGYATVT 
121:	DAEAVIVQVT PHHVLVDEYT GEWVDSQFIN GKCSNYICPT VHNSTTWHSD YKVKGLCDSN 
181:	LISMDITFFS EDGELSSLGK EGTGFRSNYF AYETGGKACK MQYCKHWGVR LPSGVWFEMA 
241:	DKDLFAAARF PECPEGSSIS APSQTSVDVS LIQDVERILD YSLCQETWSK IRAGLPISPV 
301:	DLSYLAPKNP GTGPAFTIIN GTLKYFETRY IRVDIAAPIL SRMVGMISGT TTERELWDDW 
361:	APYEDVEIGP NGVLRTSSGY KFPLYMIGHG MLDSDLHLSS KAQVFEHPHI QDAASQLPDD 
421:	ESL