9.A.73.1.1 The Ebola Virus matrix protein, VP40, of 328 aas. It promotes
virus assembly and budding by
interacting with host lipids as well as proteins of the multivesicular
body pathway and facilitates virus budding by interacting with the
nucleocapsid and the
plasma membrane. Specific interactions with membrane-associated GP and
VP24 during the budding process also occurs. The hexamer seems
to be involved in budding while the octamer binds RNA (Johnson et al. 2006). The high resolution structure of the N-terminal domain with RNA is available (1H2C_A) (Radzimanowski et al. 2014). In vitro, it catalyzes lipid flipping and therefore could be a flippase or a scramblase (RV Stahelin, personal communication). See family description for more details.
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Accession Number: | Q05128 |
Protein Name: | Matrix protein VP40 |
Length: | 326 |
Molecular Weight: | 35183.00 |
Species: | Zaire ebolavirus (strain Mayinga-76) (ZEBOV) [128952] |
Location1 / Topology2 / Orientation3: |
Virion membrane1 / Peripheral membrane protein2 |
Substrate |
phospholipid |
---|
1: MRRVILPTAP PEYMEAIYPV RSNSTIARGG NSNTGFLTPE SVNGDTPSNP LRPIADDTID
61: HASHTPGSVS SAFILEAMVN VISGPKVLMK QIPIWLPLGV ADQKTYSFDS TTAAIMLASY
121: TITHFGKATN PLVRVNRLGP GIPDHPLRLL RIGNQAFLQE FVLPPVQLPQ YFTFDLTALK
181: LITQPLPAAT WTDDTPTGSN GALRPGISFH PKLRPILLPN KSGKKGNSAD LTSPEKIQAI
241: MTSLQDFKIV PIDPTKNIMG IEVPETLVHK LTGKKVTSKN GQPIIPVLLP KYIGLDPVAP
301: GDLTMVITQD CDTCHSPASL PAVIEK