TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
1.B.18.1.1 | OMA protein component of a PST-type exopolysaccharide export system (outer membrane porin constituent) | Bacteria |
Pseudomonadota | ExoF of Rhizobium meliloti |
1.B.18.1.2 | OMA protein component of an ABC-type group 2 capsular polysaccharide (polysialic acid) export system (outer membrane porin constituent) | Bacteria |
Pseudomonadota | KpsD of E. coli |
1.B.18.2.1 | OMA protein component of an ABC-type Vi polysaccharide antigen export system, VexA (functions with VexBCD, 3.A.1.101.2) (Hashimoto et al., 1993) | Bacteria |
Pseudomonadota | VexA of Salmonella typhi (Q04976) |
1.B.18.2.2 | OMA component of exopolysaccharide exporter, PssN (outer membrane lipoprotein, oriented toward the periplasm; predominantly of β-structure, but with some α-structure) (Marczak et al., 2006). | Bacteria |
Pseudomonadota | PssN of Rhizobium leguminosarum (Q27SU9) |
1.B.18.2.3 | Capsular polysialate exporter component, CtrA. OMA of 3.A.1.101.3 (functions with 3.A.1.101.3 (ABC) and 8.B.4.2.1 (MPA2)) (Larue et al., 2011) | Bacteria |
Pseudomonadota | CtrA of Neisseria meningitidis (Q547A8) |
1.B.18.2.4 | The OMA capsular polysaccharide exporter of 394 aas, BexD (Kroll et al. 1990). | Bacteria |
Pseudomonadota | BexD of Haemophilus influenzae |
1.B.18.3.1 | OMA component of the group 1 K30 capsular polysaccharide, colanic acid, export system, Wza (Reid and Whitfield, 2005) (outer membrane porin constituent). The 3-d structure of the Wza/Wzc complex has been solved by Collins et al. (2007). It spans the periplasm, comprising a central constituent for complex formation. The x-ray structure shows an integral outer membrane transmembrane α-helical barrel with a large central cavity, similar to the secretin protein, PilQ (1.B.22.2.1) (Collins and Derrick, 2007). Wza is an octameric α-helical outer membrane channel that directly exports nascent capsular polysaccharide chains through the Wza portal (Nickerson et al. 2014). Peptides based on the C-terminal D4 domain of Wza form transmembrane, ion conducting α-helical barrels. The helix barrel contains eight D4 peptides arranged in parallel (Mahendran et al. 2017). | Bacteria |
Pseudomonadota | Wza of E. coli (P0A930) |
1.B.18.3.2 | The OMA protein component of a PST-type exopolysaccharide exporter (EpsE; TC# 2.A.66.2.11) (Huang and Schell, 1995) | Bacteria |
Pseudomonadota | EpsA of Ralstonia solanacearum (Q45407) |
1.B.18.3.3 | The Wza protein, an OMA homologue. May functions with an α-glycosyl transferase, RemC (A5FNG2) which shows limited sequence similarity to the cytoplasmic domain of 2.A.38.4.5, and the Wzc tyrosine protein kinase (8.A.3.3.4) (Shrivastava et al. 2012). | Bacteria |
Bacteroidota | Wza of Flavobactrerium johnsoniae |
1.B.18.3.4 | Outer membrane polysaccharide-specific porin, Wza of 348 aas. | Bacteria |
Chlamydiota | Wza of Parachlamydia acanthamoebae |
1.B.18.3.5 | Polysaccharide transmembrane transporter of 741 aas. | Bacteria |
Cyanobacteriota | PS exporter of Oscillatoria acuminata |
1.B.18.3.6 | Polysaccharide exporter of 680 aas | Bacteria |
Planctomycetota | PS exporter of Rhodopirellula sallentina |
1.B.18.3.7 | The outer membrane exo-polysaccharide (xanthan) exporter, GumB of 286 aas (Bianco et al. 2014). | Bacteria |
Pseudomonadota | GumB of Xanthomonas campestris |
1.B.18.3.8 | Outer membrane auxillary lipoprotein of 698 aas and 1 N-terminal TMS, GlfD or YmcA. Probably involved in capsular polysaccharide export (Peleg et al. 2005; Cuthbertson et al. 2009; Nadler et al. 2012). | Bacteria |
Pseudomonadota | GlfD of E. coli |
1.B.18.3.9 | Outer membrane polysaccharide biosynthesis/export protein, Opx, EpsY or MXAN_7417 of 219 aas and 1 N-terminal TMS. The gene encoding this protein is adjacent to EpsZ (MXAN_7415; TC# 9.B.18.1.6), an exopolysaccharide biosynthetic protein, and Wzx (MXAN_7416; TC# 2.A.66.12.12), a polysaccharide cytoplasmic membrane flippase (Pérez-Burgos et al. 2020). | Bacteria |
Myxococcota | Opx of Myxococcus xanthus |